Analysis of interatomic Contacts of Structural Units in PDB entry:
2HB0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HB0 entry

There are 2 chains in PDB entry 2HB0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 23VAL 378
B
 ALA 23PRO 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 2HB0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
77 81Right-handed 310
Helix 2
2
A
160 165Right-handed 310
Helix 3
3
A
200 204Right-handed 310
Helix 4
4
B
77 81Right-handed 310
Helix 5
5
B
160 165Right-handed 310
Helix 6
6
B
200 204Right-handed 310
Back to top of page

There are 10 sheets in PDB entry 2HB0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 40first strand
Strand 2
A
186 199parallel
Strand 3
A
169 181anti-parallel
Strand 4
A
98 106anti-parallel
Strand 5
A
112 124anti-parallel
Strand 6
A
150 157anti-parallel
Strand 7
A
48 58anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 40first strand
Strand 2
A
186 199parallel
Strand 3
A
169 181anti-parallel
Strand 4
A
68 71anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 207first strand
Strand 2
A
228 240anti-parallel
Strand 3
A
324 338anti-parallel
Strand 4
A
272 285anti-parallel
Strand 5
A
265 269anti-parallel
Strand 6
A
343 355anti-parallel
Strand 7
A
365 375anti-parallel
Strand 8
A
215 218parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 225first strand
Strand 2
A
228 240anti-parallel
Strand 3
A
324 338anti-parallel
Strand 4
A
308 310anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 290first strand
Strand 2
A
272 285anti-parallel
Strand 3
A
265 269anti-parallel
Strand 4
A
343 355anti-parallel
Strand 5
A
249 255anti-parallel
Strand 6
A
298 301anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 40first strand
Strand 2
B
186 199parallel
Strand 3
B
169 181anti-parallel
Strand 4
B
98 106anti-parallel
Strand 5
B
112 124anti-parallel
Strand 6
B
150 157anti-parallel
Strand 7
B
48 58anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 40first strand
Strand 2
B
186 199parallel
Strand 3
B
169 181anti-parallel
Strand 4
B
68 72anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 207first strand
Strand 2
B
228 240anti-parallel
Strand 3
B
324 338anti-parallel
Strand 4
B
272 285anti-parallel
Strand 5
B
265 269anti-parallel
Strand 6
B
343 355anti-parallel
Strand 7
B
365 375anti-parallel
Strand 8
B
215 218parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 225first strand
Strand 2
B
228 240anti-parallel
Strand 3
B
324 338anti-parallel
Strand 4
B
308 310anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 290first strand
Strand 2
B
272 285anti-parallel
Strand 3
B
265 269anti-parallel
Strand 4
B
343 355anti-parallel
Strand 5
B
249 256anti-parallel
Strand 6
B
298 301anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il