Analysis of interatomic Contacts of Structural Units in PDB entry:
2HBJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HBJ entry

There is 1 chain in PDB entry 2HBJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 127ASN 516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2HBJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 136Right-handed 310
Helix 2
2
A
161 166Right-handed alpha
Helix 3
3
A
183 190Right-handed alpha
Helix 4
4
A
193 197Right-handed 310
Helix 5
5
A
207 211Right-handed 310
Helix 6
6
A
218 230Right-handed alpha
Helix 7
7
A
273 276Right-handed 310
Helix 8
8
A
277 282Right-handed alpha
Helix 9
9
A
293 305Right-handed alpha
Helix 10
10
A
314 322Right-handed alpha
Helix 11
11
A
327 336Right-handed alpha
Helix 12
12
A
355 368Right-handed alpha
Helix 13
13
A
368 383Right-handed alpha
Helix 14
14
A
385 399Right-handed alpha
Helix 15
15
A
403 407Right-handed 310
Helix 16
16
A
438 457Right-handed alpha
Helix 17
17
A
459 464Right-handed alpha
Helix 18
18
A
465 476Right-handed alpha
Helix 19
19
A
479 485Right-handed alpha
Helix 20
20
A
491 497Right-handed alpha
Helix 21
21
A
497 516Right-handed alpha
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There are 2 sheets in PDB entry 2HBJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 216first strand
Strand 2
A
262 266parallel
Strand 3
A
250 257anti-parallel
Strand 4
A
234 242anti-parallel
Strand 5
A
287 290parallel
Strand 6
A
311 313parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
415 416parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il