Analysis of interatomic Contacts of Structural Units in PDB entry:
2HF8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HF8 entry

There are 2 chains in PDB entry 2HF8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11LYS 221
B
 ASP 12VAL 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2HF8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 31Right-handed alpha
Helix 2
2
A
45 58Right-handed alpha
Helix 3
3
A
72 81Right-handed alpha
Helix 4
4
A
98 107Right-handed alpha
Helix 5
5
A
108 109Right-handed 310
Helix 6
6
A
110 114Right-handed 310
Helix 7
7
A
126 131Right-handed 310
Helix 8
8
A
145 147Right-handed 310
Helix 9
9
A
149 154Right-handed alpha
Helix 10
10
A
154 159Right-handed alpha
Helix 11
11
A
168 170Right-handed 310
Helix 12
12
A
171 176Right-handed alpha
Helix 13
13
A
178 190Right-handed alpha
Helix 14
14
A
205 220Right-handed alpha
Helix 15
15
B
12 31Right-handed alpha
Helix 16
16
B
45 58Right-handed alpha
Helix 17
17
B
72 81Right-handed alpha
Helix 18
18
B
98 108Right-handed alpha
Helix 19
19
B
109 114Right-handed 310
Helix 20
20
B
126 131Right-handed 310
Helix 21
21
B
145 147Right-handed 310
Helix 22
22
B
154 161Right-handed alpha
Helix 23
23
B
168 170Right-handed 310
Helix 24
24
B
171 176Right-handed alpha
Helix 25
25
B
178 190Right-handed alpha
Helix 26
26
B
205 219Right-handed alpha
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There are 2 sheets in PDB entry 2HF8. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 90first strand
Strand 2
A
63 69parallel
Strand 3
A
116 120parallel
Strand 4
A
34 40parallel
Strand 5
A
137 143parallel
Strand 6
A
163 167parallel
Strand 7
A
194 197parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 90first strand
Strand 2
B
63 69parallel
Strand 3
B
116 120parallel
Strand 4
B
34 40parallel
Strand 5
B
137 143parallel
Strand 6
B
163 167parallel
Strand 7
B
194 197parallel
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