Analysis of interatomic Contacts of Structural Units in PDB entry:
2HIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HIL entry

There are 18 chains in PDB entry 2HIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 2LYS 158
B
THR 2LYS 158
C
THR 2LYS 158
D
THR 2LYS 158
E
THR 2LYS 158
F
THR 2LYS 158
G
THR 2LYS 158
H
THR 2LYS 158
I
THR 2LYS 158
J
THR 2LYS 158
K
THR 2LYS 158
L
THR 2LYS 158
M
THR 2LYS 158
N
THR 2LYS 158
O
THR 2LYS 158
P
THR 2LYS 158
Q
THR 2LYS 158
R
THR 2LYS 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 2HIL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 41Right-handed alpha
Helix 2
2
A
43 55Right-handed alpha
Helix 3
3
A
60 65Right-handed alpha
Helix 4
4
A
69 74Right-handed 310
Helix 5
5
A
143 147Right-handed 310
Helix 6
6
A
148 152Right-handed 310
Helix 7
7
B
4 41Right-handed alpha
Helix 8
8
B
43 55Right-handed alpha
Helix 9
9
B
60 65Right-handed alpha
Helix 10
10
B
69 74Right-handed 310
Helix 11
11
B
143 147Right-handed 310
Helix 12
12
B
148 152Right-handed 310
Helix 13
13
C
4 41Right-handed alpha
Helix 14
14
C
43 55Right-handed alpha
Helix 15
15
C
60 65Right-handed alpha
Helix 16
16
C
69 74Right-handed 310
Helix 17
17
C
143 147Right-handed 310
Helix 18
18
C
148 152Right-handed 310
Helix 19
19
D
4 41Right-handed alpha
Helix 20
20
D
43 55Right-handed alpha
Helix 21
21
D
60 65Right-handed alpha
Helix 22
22
D
69 74Right-handed 310
Helix 23
23
D
143 147Right-handed 310
Helix 24
24
D
148 152Right-handed 310
Helix 25
25
E
4 41Right-handed alpha
Helix 26
26
E
43 55Right-handed alpha
Helix 27
27
E
60 65Right-handed alpha
Helix 28
28
E
69 74Right-handed 310
Helix 29
29
E
143 147Right-handed 310
Helix 30
30
E
148 152Right-handed 310
Helix 31
31
F
4 41Right-handed alpha
Helix 32
32
F
43 55Right-handed alpha
Helix 33
33
F
60 65Right-handed alpha
Helix 34
34
F
69 74Right-handed 310
Helix 35
35
F
143 147Right-handed 310
Helix 36
36
F
148 152Right-handed 310
Helix 37
37
G
4 41Right-handed alpha
Helix 38
38
G
43 55Right-handed alpha
Helix 39
39
G
60 65Right-handed alpha
Helix 40
40
G
69 74Right-handed 310
Helix 41
41
G
143 147Right-handed 310
Helix 42
42
G
148 152Right-handed 310
Helix 43
43
H
4 41Right-handed alpha
Helix 44
44
H
43 55Right-handed alpha
Helix 45
45
H
60 65Right-handed alpha
Helix 46
46
H
69 74Right-handed 310
Helix 47
47
H
143 147Right-handed 310
Helix 48
48
H
148 152Right-handed 310
Helix 49
49
I
4 41Right-handed alpha
Helix 50
50
I
43 55Right-handed alpha
Helix 51
51
I
60 65Right-handed alpha
Helix 52
52
I
69 74Right-handed 310
Helix 53
53
I
143 147Right-handed 310
Helix 54
54
I
148 152Right-handed 310
Helix 55
55
J
4 41Right-handed alpha
Helix 56
56
J
43 55Right-handed alpha
Helix 57
57
J
60 65Right-handed alpha
Helix 58
58
J
69 74Right-handed 310
Helix 59
59
J
143 147Right-handed 310
Helix 60
60
J
148 152Right-handed 310
Helix 61
61
K
4 41Right-handed alpha
Helix 62
62
K
43 55Right-handed alpha
Helix 63
63
K
60 65Right-handed alpha
Helix 64
64
K
69 74Right-handed 310
Helix 65
65
K
143 147Right-handed 310
Helix 66
66
K
148 152Right-handed 310
Helix 67
67
L
4 41Right-handed alpha
Helix 68
68
L
43 55Right-handed alpha
Helix 69
69
L
60 65Right-handed alpha
Helix 70
70
L
69 74Right-handed 310
Helix 71
71
L
143 147Right-handed 310
Helix 72
72
L
148 152Right-handed 310
Helix 73
73
M
4 41Right-handed alpha
Helix 74
74
M
43 55Right-handed alpha
Helix 75
75
M
60 65Right-handed alpha
Helix 76
76
M
69 74Right-handed 310
Helix 77
77
M
143 147Right-handed 310
Helix 78
78
M
148 152Right-handed 310
Helix 79
79
N
4 41Right-handed alpha
Helix 80
80
N
43 55Right-handed alpha
Helix 81
81
N
60 65Right-handed alpha
Helix 82
82
N
69 74Right-handed 310
Helix 83
83
N
143 147Right-handed 310
Helix 84
84
N
148 152Right-handed 310
Helix 85
85
O
4 41Right-handed alpha
Helix 86
86
O
43 55Right-handed alpha
Helix 87
87
O
60 65Right-handed alpha
Helix 88
88
O
69 74Right-handed 310
Helix 89
89
O
143 147Right-handed 310
Helix 90
90
O
148 152Right-handed 310
Helix 91
91
P
4 41Right-handed alpha
Helix 92
92
P
43 55Right-handed alpha
Helix 93
93
P
60 65Right-handed alpha
Helix 94
94
P
69 74Right-handed 310
Helix 95
95
P
143 147Right-handed 310
Helix 96
96
P
148 152Right-handed 310
Helix 97
97
Q
4 41Right-handed alpha
Helix 98
98
Q
43 55Right-handed alpha
Helix 99
99
Q
60 65Right-handed alpha
Helix 100
100
Q
69 74Right-handed 310
Helix 101
101
Q
143 147Right-handed 310
Helix 102
102
Q
148 152Right-handed 310
Helix 103
103
R
4 41Right-handed alpha
Helix 104
104
R
43 55Right-handed alpha
Helix 105
105
R
60 65Right-handed alpha
Helix 106
106
R
69 74Right-handed 310
Helix 107
107
R
143 147Right-handed 310
Helix 108
108
R
148 152Right-handed 310
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There are 36 sheets in PDB entry 2HIL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 84first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
105 112anti-parallel
Strand 4
A
117 122anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
125 129first strand
Strand 2
A
132 135anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
78 84first strand
Strand 2
B
87 92anti-parallel
Strand 3
B
105 112anti-parallel
Strand 4
B
117 122anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
125 129first strand
Strand 2
B
132 135anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
78 84first strand
Strand 2
C
87 92anti-parallel
Strand 3
C
105 112anti-parallel
Strand 4
C
117 122anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
125 129first strand
Strand 2
C
132 135anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
78 84first strand
Strand 2
D
87 92anti-parallel
Strand 3
D
105 112anti-parallel
Strand 4
D
117 122anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
125 129first strand
Strand 2
D
132 135anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
78 84first strand
Strand 2
E
87 92anti-parallel
Strand 3
E
105 112anti-parallel
Strand 4
E
117 122anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
125 129first strand
Strand 2
E
132 135anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
78 84first strand
Strand 2
F
87 92anti-parallel
Strand 3
F
105 112anti-parallel
Strand 4
F
117 122anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
125 129first strand
Strand 2
F
132 135anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
78 84first strand
Strand 2
G
87 92anti-parallel
Strand 3
G
105 112anti-parallel
Strand 4
G
117 122anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
125 129first strand
Strand 2
G
132 135anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
78 84first strand
Strand 2
H
87 92anti-parallel
Strand 3
H
105 112anti-parallel
Strand 4
H
117 122anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
125 129first strand
Strand 2
H
132 135anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
78 84first strand
Strand 2
I
87 92anti-parallel
Strand 3
I
105 112anti-parallel
Strand 4
I
117 122anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
125 129first strand
Strand 2
I
132 135anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
78 84first strand
Strand 2
J
87 92anti-parallel
Strand 3
J
105 112anti-parallel
Strand 4
J
117 122anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
125 129first strand
Strand 2
J
132 135anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
78 84first strand
Strand 2
K
87 92anti-parallel
Strand 3
K
105 112anti-parallel
Strand 4
K
117 122anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
125 129first strand
Strand 2
K
132 135anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
78 84first strand
Strand 2
L
87 92anti-parallel
Strand 3
L
105 112anti-parallel
Strand 4
L
117 122anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
125 129first strand
Strand 2
L
132 135anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
78 84first strand
Strand 2
M
87 92anti-parallel
Strand 3
M
105 112anti-parallel
Strand 4
M
117 122anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
125 129first strand
Strand 2
M
132 135anti-parallel
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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
78 84first strand
Strand 2
N
87 92anti-parallel
Strand 3
N
105 112anti-parallel
Strand 4
N
117 122anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
125 129first strand
Strand 2
N
132 135anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
78 84first strand
Strand 2
O
87 92anti-parallel
Strand 3
O
105 112anti-parallel
Strand 4
O
117 122anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
125 129first strand
Strand 2
O
132 135anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
78 84first strand
Strand 2
P
87 92anti-parallel
Strand 3
P
105 112anti-parallel
Strand 4
P
117 122anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
125 129first strand
Strand 2
P
132 135anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
78 84first strand
Strand 2
Q
87 92anti-parallel
Strand 3
Q
105 112anti-parallel
Strand 4
Q
117 122anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
125 129first strand
Strand 2
Q
132 135anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
78 84first strand
Strand 2
R
87 92anti-parallel
Strand 3
R
105 112anti-parallel
Strand 4
R
117 122anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
125 129first strand
Strand 2
R
132 135anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il