Analysis of interatomic Contacts of Structural Units in PDB entry:
2HJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HJ0 entry

There are 2 chains in PDB entry 2HJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3GLU 513
B
 GLU 3GLU 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 2HJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 18Right-handed alpha
Helix 2
2
A
51 59Right-handed alpha
Helix 3
3
A
73 77Right-handed 310
Helix 4
4
A
78 90Right-handed alpha
Helix 5
5
A
103 107Right-handed 310
Helix 6
6
A
108 115Right-handed alpha
Helix 7
7
A
126 136Right-handed alpha
Helix 8
8
A
147 158Right-handed alpha
Helix 9
9
A
190 200Right-handed alpha
Helix 10
10
A
221 225Right-handed 310
Helix 11
11
A
237 242Right-handed alpha
Helix 12
12
A
250 266Right-handed alpha
Helix 13
13
A
281 298Right-handed alpha
Helix 14
14
A
310 319Right-handed alpha
Helix 15
15
A
332 342Right-handed alpha
Helix 16
16
A
350 356Right-handed alpha
Helix 17
17
A
362 367Right-handed 310
Helix 18
18
A
399 407Right-handed alpha
Helix 19
19
A
434 438Right-handed 310
Helix 20
20
A
453 460Right-handed alpha
Helix 21
21
A
469 482Right-handed alpha
Helix 22
22
B
11 18Right-handed alpha
Helix 23
23
B
51 59Right-handed alpha
Helix 24
24
B
73 77Right-handed 310
Helix 25
25
B
78 90Right-handed alpha
Helix 26
26
B
103 107Right-handed 310
Helix 27
27
B
108 115Right-handed alpha
Helix 28
28
B
126 136Right-handed alpha
Helix 29
29
B
147 158Right-handed alpha
Helix 30
30
B
190 200Right-handed alpha
Helix 31
31
B
221 225Right-handed 310
Helix 32
32
B
237 242Right-handed alpha
Helix 33
33
B
250 266Right-handed alpha
Helix 34
34
B
281 298Right-handed alpha
Helix 35
35
B
310 319Right-handed alpha
Helix 36
36
B
332 342Right-handed alpha
Helix 37
37
B
350 356Right-handed alpha
Helix 38
38
B
362 367Right-handed 310
Helix 39
39
B
399 407Right-handed alpha
Helix 40
40
B
434 438Right-handed 310
Helix 41
41
B
453 460Right-handed alpha
Helix 42
42
B
469 482Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 2HJ0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
B
37 38anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
B
31 32anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
227 230parallel
Strand 3
A
202 207parallel
Strand 4
A
164 169parallel
Strand 5
A
66 69parallel
Strand 6
A
95 99parallel
Strand 7
A
118 123parallel
Strand 8
A
143 145parallel
Strand 9
A
489 498parallel
Strand 10
A
504 511anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 348first strand
Strand 2
A
322 327parallel
Strand 3
A
302 305parallel
Strand 4
A
275 277parallel
Strand 5
A
369 372parallel
Strand 6
A
409 413parallel
Strand 7
A
440 442parallel
Strand 8
A
447 449anti-parallel
Strand 9
A
467 468parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 309first strand
Strand 2
A
329 330parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 377first strand
Strand 2
A
383 384anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 418first strand
Strand 2
A
421 422anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
227 230parallel
Strand 3
B
202 207parallel
Strand 4
B
164 169parallel
Strand 5
B
66 69parallel
Strand 6
B
95 99parallel
Strand 7
B
118 123parallel
Strand 8
B
143 145parallel
Strand 9
B
489 498parallel
Strand 10
B
504 511anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 348first strand
Strand 2
B
322 327parallel
Strand 3
B
302 305parallel
Strand 4
B
275 277parallel
Strand 5
B
369 372parallel
Strand 6
B
409 413parallel
Strand 7
B
440 442parallel
Strand 8
B
447 449anti-parallel
Strand 9
B
467 468parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 309first strand
Strand 2
B
329 330parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
376 377first strand
Strand 2
B
383 384anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 418first strand
Strand 2
B
421 422anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il