Analysis of interatomic Contacts of Structural Units in PDB entry:
2HJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HJ9 entry

There are 4 chains in PDB entry 2HJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 27ASN 365
B
 GLY 27ASN 365
C
 SER 52GLN 270
D
 ALA 58GLN 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 2HJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 38Right-handed alpha
Helix 2
2
A
38 54Right-handed alpha
Helix 3
3
A
80 96Right-handed alpha
Helix 4
4
A
112 126Right-handed alpha
Helix 5
5
A
137 148Right-handed alpha
Helix 6
6
A
164 168Right-handed 310
Helix 7
7
A
179 195Right-handed alpha
Helix 8
8
A
209 228Right-handed alpha
Helix 9
9
A
240 255Right-handed alpha
Helix 10
10
A
265 279Right-handed alpha
Helix 11
11
A
292 301Right-handed alpha
Helix 12
12
A
313 328Right-handed alpha
Helix 13
13
A
348 360Right-handed alpha
Helix 14
14
B
30 38Right-handed alpha
Helix 15
15
B
38 54Right-handed alpha
Helix 16
16
B
80 96Right-handed alpha
Helix 17
17
B
120 125Right-handed alpha
Helix 18
18
B
137 151Right-handed alpha
Helix 19
19
B
164 168Right-handed 310
Helix 20
20
B
179 195Right-handed alpha
Helix 21
21
B
209 228Right-handed alpha
Helix 22
22
B
240 255Right-handed alpha
Helix 23
23
B
265 279Right-handed alpha
Helix 24
24
B
292 301Right-handed alpha
Helix 25
25
B
313 328Right-handed alpha
Helix 26
26
B
348 360Right-handed alpha
Helix 27
27
C
52 79Right-handed alpha
Helix 28
28
C
81 91Right-handed alpha
Helix 29
29
C
92 107Right-handed alpha
Helix 30
30
C
108 111Right-handed 310
Helix 31
31
C
129 134Right-handed 310
Helix 32
32
C
136 147Right-handed alpha
Helix 33
33
C
195 207Right-handed alpha
Helix 34
34
C
231 237Right-handed alpha
Helix 35
35
D
59 79Right-handed alpha
Helix 36
36
D
81 91Right-handed alpha
Helix 37
37
D
92 107Right-handed alpha
Helix 38
38
D
129 134Right-handed 310
Helix 39
39
D
136 147Right-handed alpha
Helix 40
40
D
195 206Right-handed alpha
Helix 41
41
D
231 236Right-handed alpha
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There are 10 sheets in PDB entry 2HJ9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 106first strand
Strand 2
A
67 73parallel
Strand 3
A
130 134parallel
Strand 4
A
154 158parallel
Strand 5
A
174 177parallel
Strand 6
A
335 337parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
260 263parallel
Strand 3
A
200 204parallel
Strand 4
A
230 235parallel
Strand 5
D
181 191anti-parallel
Strand 6
D
114 119anti-parallel
Strand 7
D
122 126anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
260 263parallel
Strand 3
A
200 204parallel
Strand 4
A
230 235parallel
Strand 5
D
181 191anti-parallel
Strand 6
D
163 175anti-parallel
Strand 7
D
154 160anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 310first strand
Strand 2
A
340 344anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 106first strand
Strand 2
B
67 73parallel
Strand 3
B
130 134parallel
Strand 4
B
154 158parallel
Strand 5
B
174 178parallel
Strand 6
B
335 338parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 235first strand
Strand 2
B
200 204parallel
Strand 3
B
260 263parallel
Strand 4
B
285 286parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 310first strand
Strand 2
B
340 344anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
123 126first strand
Strand 2
C
114 118anti-parallel
Strand 3
C
182 191anti-parallel
Strand 4
C
163 175anti-parallel
Strand 5
C
154 160anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
218 222first strand
Strand 2
C
210 215anti-parallel
Strand 3
C
260 269anti-parallel
Strand 4
C
250 257anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
218 222first strand
Strand 2
D
210 215anti-parallel
Strand 3
D
260 269anti-parallel
Strand 4
D
250 257anti-parallel
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