Analysis of interatomic Contacts of Structural Units in PDB entry:
2HJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HJH entry

There are 2 chains in PDB entry 2HJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 210ASP 556
B
 PRO 211SER 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 2HJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
243 254Right-handed alpha
Helix 2
2
A
263 270Right-handed 310
Helix 3
3
A
279 284Right-handed alpha
Helix 4
4
A
285 288Right-handed 310
Helix 5
5
A
291 296Right-handed 310
Helix 6
6
A
297 304Right-handed alpha
Helix 7
7
A
305 312Right-handed alpha
Helix 8
8
A
313 316Right-handed 310
Helix 9
9
A
323 335Right-handed alpha
Helix 10
10
A
348 353Right-handed alpha
Helix 11
11
A
384 390Right-handed alpha
Helix 12
12
A
399 407Right-handed alpha
Helix 13
13
A
450 461Right-handed alpha
Helix 14
14
A
478 480Right-handed 310
Helix 15
15
A
481 486Right-handed alpha
Helix 16
16
A
512 525Right-handed alpha
Helix 17
17
A
532 538Right-handed alpha
Helix 18
18
B
243 254Right-handed alpha
Helix 19
19
B
263 270Right-handed 310
Helix 20
20
B
279 288Right-handed alpha
Helix 21
21
B
291 296Right-handed 310
Helix 22
22
B
297 304Right-handed alpha
Helix 23
23
B
305 312Right-handed alpha
Helix 24
24
B
313 315Right-handed 310
Helix 25
25
B
323 335Right-handed alpha
Helix 26
26
B
349 354Right-handed alpha
Helix 27
27
B
356 358Right-handed 310
Helix 28
28
B
384 390Right-handed alpha
Helix 29
29
B
399 407Right-handed alpha
Helix 30
30
B
423 427Right-handed 310
Helix 31
31
B
451 464Right-handed alpha
Helix 32
32
B
478 480Right-handed 310
Helix 33
33
B
481 486Right-handed alpha
Helix 34
34
B
512 524Right-handed alpha
Helix 35
35
B
532 537Right-handed alpha
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There are 7 sheets in PDB entry 2HJH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 217first strand
Strand 2
B
213 217anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
476 477anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 362first strand
Strand 2
A
338 343parallel
Strand 3
A
257 261parallel
Strand 4
A
466 470parallel
Strand 5
A
492 496parallel
Strand 6
A
507 510parallel
Strand 7
A
550 555parallel
Strand 8
A
541 547anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
365 372anti-parallel
Strand 3
A
438 442anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 224first strand
Strand 2
B
476 477anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 362first strand
Strand 2
B
338 343parallel
Strand 3
B
257 261parallel
Strand 4
B
466 470parallel
Strand 5
B
492 496parallel
Strand 6
B
507 510parallel
Strand 7
B
550 554parallel
Strand 8
B
542 545anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 380first strand
Strand 2
B
365 372anti-parallel
Strand 3
B
438 442anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il