Analysis of interatomic Contacts of Structural Units in PDB entry:
2HJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HJR entry

There are 12 chains in PDB entry 2HJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 13SER 325
B
MET 13LEU 326
C
MET 13LEU 326
D
MET 13LEU 326
E
MET 13SER 325
F
MET 13LEU 326
G
MET 13SER 325
H
MET 13LEU 326
I
MET 13SER 325
J
MET 13LEU 326
K
MET 13SER 325
L
MET 13LEU 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are192 helices in PDB entry 2HJR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 36Right-handed alpha
Helix 2
2
A
49 66Right-handed alpha
Helix 3
3
A
76 81Right-handed 310
Helix 4
4
A
100 102Right-handed 310
Helix 5
5
A
103 122Right-handed alpha
Helix 6
6
A
133 146Right-handed alpha
Helix 7
7
A
148 150Right-handed 310
Helix 8
8
A
156 173Right-handed alpha
Helix 9
9
A
175 177Right-handed 310
Helix 10
10
A
195 197Right-handed 310
Helix 11
11
A
205 211Right-handed alpha
Helix 12
12
A
215 228Right-handed alpha
Helix 13
13
A
228 238Right-handed alpha
Helix 14
14
A
243 259Right-handed alpha
Helix 15
15
A
274 276Right-handed 310
Helix 16
16
A
302 325Right-handed alpha
Helix 17
17
B
23 36Right-handed alpha
Helix 18
18
B
49 66Right-handed alpha
Helix 19
19
B
76 81Right-handed 310
Helix 20
20
B
100 102Right-handed 310
Helix 21
21
B
103 122Right-handed alpha
Helix 22
22
B
133 146Right-handed alpha
Helix 23
23
B
148 150Right-handed 310
Helix 24
24
B
156 173Right-handed alpha
Helix 25
25
B
175 177Right-handed 310
Helix 26
26
B
195 197Right-handed 310
Helix 27
27
B
205 211Right-handed alpha
Helix 28
28
B
215 228Right-handed alpha
Helix 29
29
B
228 238Right-handed alpha
Helix 30
30
B
243 259Right-handed alpha
Helix 31
31
B
274 276Right-handed 310
Helix 32
32
B
302 325Right-handed alpha
Helix 33
33
C
23 36Right-handed alpha
Helix 34
34
C
49 66Right-handed alpha
Helix 35
35
C
76 81Right-handed 310
Helix 36
36
C
100 102Right-handed 310
Helix 37
37
C
103 122Right-handed alpha
Helix 38
38
C
133 146Right-handed alpha
Helix 39
39
C
148 150Right-handed 310
Helix 40
40
C
156 173Right-handed alpha
Helix 41
41
C
175 177Right-handed 310
Helix 42
42
C
195 197Right-handed 310
Helix 43
43
C
205 211Right-handed alpha
Helix 44
44
C
215 228Right-handed alpha
Helix 45
45
C
228 238Right-handed alpha
Helix 46
46
C
243 259Right-handed alpha
Helix 47
47
C
274 276Right-handed 310
Helix 48
48
C
302 325Right-handed alpha
Helix 49
49
D
23 36Right-handed alpha
Helix 50
50
D
49 66Right-handed alpha
Helix 51
51
D
76 81Right-handed 310
Helix 52
52
D
100 102Right-handed 310
Helix 53
53
D
103 122Right-handed alpha
Helix 54
54
D
133 146Right-handed alpha
Helix 55
55
D
148 150Right-handed 310
Helix 56
56
D
156 173Right-handed alpha
Helix 57
57
D
175 177Right-handed 310
Helix 58
58
D
195 197Right-handed 310
Helix 59
59
D
205 211Right-handed alpha
Helix 60
60
D
215 228Right-handed alpha
Helix 61
61
D
228 238Right-handed alpha
Helix 62
62
D
243 259Right-handed alpha
Helix 63
63
D
274 276Right-handed 310
Helix 64
64
D
302 325Right-handed alpha
Helix 65
65
E
23 36Right-handed alpha
Helix 66
66
E
49 66Right-handed alpha
Helix 67
67
E
76 81Right-handed 310
Helix 68
68
E
99 102Right-handed 310
Helix 69
69
E
103 122Right-handed alpha
Helix 70
70
E
133 146Right-handed alpha
Helix 71
71
E
148 150Right-handed 310
Helix 72
72
E
156 173Right-handed alpha
Helix 73
73
E
175 177Right-handed 310
Helix 74
74
E
195 197Right-handed 310
Helix 75
75
E
205 211Right-handed alpha
Helix 76
76
E
215 228Right-handed alpha
Helix 77
77
E
228 238Right-handed alpha
Helix 78
78
E
243 259Right-handed alpha
Helix 79
79
E
274 276Right-handed 310
Helix 80
80
E
302 325Right-handed alpha
Helix 81
81
F
23 36Right-handed alpha
Helix 82
82
F
49 66Right-handed alpha
Helix 83
83
F
76 81Right-handed 310
Helix 84
84
F
100 102Right-handed 310
Helix 85
85
F
103 122Right-handed alpha
Helix 86
86
F
133 146Right-handed alpha
Helix 87
87
F
148 150Right-handed 310
Helix 88
88
F
156 173Right-handed alpha
Helix 89
89
F
175 177Right-handed 310
Helix 90
90
F
195 197Right-handed 310
Helix 91
91
F
205 211Right-handed alpha
Helix 92
92
F
215 228Right-handed alpha
Helix 93
93
F
228 238Right-handed alpha
Helix 94
94
F
243 259Right-handed alpha
Helix 95
95
F
274 276Right-handed 310
Helix 96
96
F
302 325Right-handed alpha
Helix 97
97
G
23 36Right-handed alpha
Helix 98
98
G
49 66Right-handed alpha
Helix 99
99
G
76 81Right-handed 310
Helix 100
100
G
99 102Right-handed 310
Helix 101
101
G
103 122Right-handed alpha
Helix 102
102
G
133 146Right-handed alpha
Helix 103
103
G
148 150Right-handed 310
Helix 104
104
G
156 173Right-handed alpha
Helix 105
105
G
175 177Right-handed 310
Helix 106
106
G
195 197Right-handed 310
Helix 107
107
G
205 211Right-handed alpha
Helix 108
108
G
215 228Right-handed alpha
Helix 109
109
G
228 238Right-handed alpha
Helix 110
110
G
243 259Right-handed alpha
Helix 111
111
G
274 276Right-handed 310
Helix 112
112
G
302 324Right-handed alpha
Helix 113
113
H
23 36Right-handed alpha
Helix 114
114
H
49 66Right-handed alpha
Helix 115
115
H
76 81Right-handed 310
Helix 116
116
H
100 102Right-handed 310
Helix 117
117
H
103 122Right-handed alpha
Helix 118
118
H
133 146Right-handed alpha
Helix 119
119
H
148 150Right-handed 310
Helix 120
120
H
156 173Right-handed alpha
Helix 121
121
H
175 177Right-handed 310
Helix 122
122
H
195 197Right-handed 310
Helix 123
123
H
205 211Right-handed alpha
Helix 124
124
H
215 228Right-handed alpha
Helix 125
125
H
228 238Right-handed alpha
Helix 126
126
H
243 259Right-handed alpha
Helix 127
127
H
274 276Right-handed 310
Helix 128
128
H
302 325Right-handed alpha
Helix 129
129
I
23 36Right-handed alpha
Helix 130
130
I
49 66Right-handed alpha
Helix 131
131
I
76 81Right-handed 310
Helix 132
132
I
100 102Right-handed 310
Helix 133
133
I
103 122Right-handed alpha
Helix 134
134
I
133 146Right-handed alpha
Helix 135
135
I
148 150Right-handed 310
Helix 136
136
I
156 173Right-handed alpha
Helix 137
137
I
175 177Right-handed 310
Helix 138
138
I
195 197Right-handed 310
Helix 139
139
I
205 211Right-handed alpha
Helix 140
140
I
215 228Right-handed alpha
Helix 141
141
I
228 238Right-handed alpha
Helix 142
142
I
243 259Right-handed alpha
Helix 143
143
I
274 276Right-handed 310
Helix 144
144
I
302 325Right-handed alpha
Helix 145
145
J
23 36Right-handed alpha
Helix 146
146
J
49 66Right-handed alpha
Helix 147
147
J
76 81Right-handed 310
Helix 148
148
J
99 102Right-handed 310
Helix 149
149
J
103 122Right-handed alpha
Helix 150
150
J
133 146Right-handed alpha
Helix 151
151
J
148 150Right-handed 310
Helix 152
152
J
156 173Right-handed alpha
Helix 153
153
J
175 177Right-handed 310
Helix 154
154
J
195 197Right-handed 310
Helix 155
155
J
205 211Right-handed alpha
Helix 156
156
J
215 228Right-handed alpha
Helix 157
157
J
228 238Right-handed alpha
Helix 158
158
J
243 259Right-handed alpha
Helix 159
159
J
274 276Right-handed 310
Helix 160
160
J
302 325Right-handed alpha
Helix 161
161
K
23 36Right-handed alpha
Helix 162
162
K
49 66Right-handed alpha
Helix 163
163
K
76 81Right-handed 310
Helix 164
164
K
100 102Right-handed 310
Helix 165
165
K
103 122Right-handed alpha
Helix 166
166
K
133 146Right-handed alpha
Helix 167
167
K
148 150Right-handed 310
Helix 168
168
K
156 173Right-handed alpha
Helix 169
169
K
175 177Right-handed 310
Helix 170
170
K
195 197Right-handed 310
Helix 171
171
K
205 211Right-handed alpha
Helix 172
172
K
215 228Right-handed alpha
Helix 173
173
K
228 238Right-handed alpha
Helix 174
174
K
243 259Right-handed alpha
Helix 175
175
K
274 276Right-handed 310
Helix 176
176
K
302 324Right-handed alpha
Helix 177
177
L
23 36Right-handed alpha
Helix 178
178
L
49 66Right-handed alpha
Helix 179
179
L
76 81Right-handed 310
Helix 180
180
L
99 102Right-handed 310
Helix 181
181
L
103 122Right-handed alpha
Helix 182
182
L
133 146Right-handed alpha
Helix 183
183
L
148 150Right-handed 310
Helix 184
184
L
156 173Right-handed alpha
Helix 185
185
L
175 177Right-handed 310
Helix 186
186
L
195 197Right-handed 310
Helix 187
187
L
205 211Right-handed alpha
Helix 188
188
L
215 228Right-handed alpha
Helix 189
189
L
228 238Right-handed alpha
Helix 190
190
L
243 259Right-handed alpha
Helix 191
191
L
274 276Right-handed 310
Helix 192
192
L
302 325Right-handed alpha
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There are 39 sheets in PDB entry 2HJR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
71 74first strand
Strand 2
A
40 44parallel
Strand 3
A
16 20parallel
Strand 4
A
85 88parallel
Strand 5
A
126 129parallel
Strand 6
A
152 154parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
179 180first strand
Strand 2
A
199 200anti-parallel
Strand 3
A
203 204anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
183 184first strand
Strand 2
A
192 193anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
263 272first strand
Strand 2
A
278 289anti-parallel
Strand 3
A
292 296anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
71 74first strand
Strand 2
B
40 44parallel
Strand 3
B
16 20parallel
Strand 4
B
85 88parallel
Strand 5
B
126 129parallel
Strand 6
B
152 155parallel
Strand 7
B
263 272anti-parallel
Strand 8
B
278 289anti-parallel
Strand 9
B
292 296anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
179 180first strand
Strand 2
B
199 200anti-parallel
Strand 3
B
203 204anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
183 184first strand
Strand 2
B
192 193anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
71 74first strand
Strand 2
C
40 44parallel
Strand 3
C
16 20parallel
Strand 4
C
85 88parallel
Strand 5
C
126 129parallel
Strand 6
C
152 154parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
179 180first strand
Strand 2
C
199 200anti-parallel
Strand 3
C
203 204anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
183 184first strand
Strand 2
C
192 193anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
263 272first strand
Strand 2
C
278 289anti-parallel
Strand 3
C
292 296anti-parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
71 74first strand
Strand 2
D
40 44parallel
Strand 3
D
16 20parallel
Strand 4
D
85 88parallel
Strand 5
D
126 129parallel
Strand 6
D
152 155parallel
Strand 7
D
263 272anti-parallel
Strand 8
D
278 289anti-parallel
Strand 9
D
292 296anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
179 180first strand
Strand 2
D
199 200anti-parallel
Strand 3
D
203 204anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
183 184first strand
Strand 2
D
192 193anti-parallel
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There are 9 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
71 74first strand
Strand 2
E
40 44parallel
Strand 3
E
16 20parallel
Strand 4
E
85 88parallel
Strand 5
E
126 129parallel
Strand 6
E
152 155parallel
Strand 7
E
263 272anti-parallel
Strand 8
E
278 289anti-parallel
Strand 9
E
292 296anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
179 180first strand
Strand 2
E
199 200anti-parallel
Strand 3
E
203 204anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
183 184first strand
Strand 2
E
192 193anti-parallel
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There are 9 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
71 74first strand
Strand 2
F
40 44parallel
Strand 3
F
16 20parallel
Strand 4
F
85 88parallel
Strand 5
F
126 129parallel
Strand 6
F
152 155parallel
Strand 7
F
263 272anti-parallel
Strand 8
F
278 289anti-parallel
Strand 9
F
292 296anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
179 180first strand
Strand 2
F
199 200anti-parallel
Strand 3
F
203 204anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
183 184first strand
Strand 2
F
192 193anti-parallel
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There are 9 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
71 74first strand
Strand 2
G
40 44parallel
Strand 3
G
16 20parallel
Strand 4
G
85 88parallel
Strand 5
G
126 129parallel
Strand 6
G
152 155parallel
Strand 7
G
263 272anti-parallel
Strand 8
G
278 289anti-parallel
Strand 9
G
292 296anti-parallel
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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
179 180first strand
Strand 2
G
199 200anti-parallel
Strand 3
G
203 204anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
183 184first strand
Strand 2
G
192 193anti-parallel
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There are 9 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
71 74first strand
Strand 2
H
40 44parallel
Strand 3
H
16 20parallel
Strand 4
H
85 88parallel
Strand 5
H
126 129parallel
Strand 6
H
152 155parallel
Strand 7
H
263 272anti-parallel
Strand 8
H
278 289anti-parallel
Strand 9
H
292 296anti-parallel
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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
179 180first strand
Strand 2
H
199 200anti-parallel
Strand 3
H
203 204anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
183 184first strand
Strand 2
H
192 193anti-parallel
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There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
71 74first strand
Strand 2
I
40 44parallel
Strand 3
I
16 20parallel
Strand 4
I
85 88parallel
Strand 5
I
126 129parallel
Strand 6
I
152 155parallel
Strand 7
I
263 272anti-parallel
Strand 8
I
278 289anti-parallel
Strand 9
I
292 296anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
179 180first strand
Strand 2
I
199 200anti-parallel
Strand 3
I
203 204anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
183 184first strand
Strand 2
I
192 193anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
71 74first strand
Strand 2
J
40 44parallel
Strand 3
J
16 20parallel
Strand 4
J
85 88parallel
Strand 5
J
126 129parallel
Strand 6
J
152 154parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
179 180first strand
Strand 2
J
199 200anti-parallel
Strand 3
J
203 204anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
183 184first strand
Strand 2
J
192 193anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
263 272first strand
Strand 2
J
278 289anti-parallel
Strand 3
J
292 296anti-parallel
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There are 9 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
71 74first strand
Strand 2
K
40 44parallel
Strand 3
K
16 20parallel
Strand 4
K
85 88parallel
Strand 5
K
126 129parallel
Strand 6
K
152 155parallel
Strand 7
K
263 272anti-parallel
Strand 8
K
278 289anti-parallel
Strand 9
K
292 296anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
179 180first strand
Strand 2
K
199 200anti-parallel
Strand 3
K
203 204anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
183 184first strand
Strand 2
K
192 193anti-parallel
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There are 9 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
71 74first strand
Strand 2
L
40 44parallel
Strand 3
L
16 20parallel
Strand 4
L
85 88parallel
Strand 5
L
126 129parallel
Strand 6
L
152 155parallel
Strand 7
L
263 272anti-parallel
Strand 8
L
278 289anti-parallel
Strand 9
L
292 296anti-parallel
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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
179 180first strand
Strand 2
L
199 200anti-parallel
Strand 3
L
203 204anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
183 184first strand
Strand 2
L
192 193anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il