Analysis of interatomic Contacts of Structural Units in PDB entry:
2HJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HJS entry

There is 1 chain in PDB entry 2HJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3LEU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2HJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
60 62Right-handed 310
Helix 3
3
A
63 67Right-handed 310
Helix 4
4
A
75 89Right-handed alpha
Helix 5
5
A
109 114Right-handed alpha
Helix 6
6
A
115 120Right-handed 310
Helix 7
7
A
130 144Right-handed alpha
Helix 8
8
A
160 163Right-handed 310
Helix 9
9
A
164 180Right-handed alpha
Helix 10
10
A
210 224Right-handed alpha
Helix 11
11
A
225 228Right-handed 310
Helix 12
12
A
257 268Right-handed alpha
Helix 13
13
A
320 335Right-handed alpha
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There are 3 sheets in PDB entry 2HJS. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
34 38parallel
Strand 3
A
7 10parallel
Strand 4
A
69 72parallel
Strand 5
A
92 95parallel
Strand 6
A
125 127parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
52 55anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 237first strand
Strand 2
A
149 158parallel
Strand 3
A
244 252anti-parallel
Strand 4
A
306 313anti-parallel
Strand 5
A
292 299anti-parallel
Strand 6
A
271 273parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il