Analysis of interatomic Contacts of Structural Units in PDB entry:
2HJV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HJV entry

There are 2 chains in PDB entry 2HJV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 211ALA 368
B
 ASN 214ALA 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 2HJV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
223 225Right-handed 310
Helix 2
2
A
226 239Right-handed alpha
Helix 3
3
A
249 263Right-handed alpha
Helix 4
4
A
275 288Right-handed alpha
Helix 5
5
A
298 301Right-handed 310
Helix 6
6
A
320 328Right-handed alpha
Helix 7
7
A
345 347Right-handed 310
Helix 8
8
A
348 360Right-handed alpha
Helix 9
9
B
223 225Right-handed 310
Helix 10
10
B
226 239Right-handed alpha
Helix 11
11
B
249 263Right-handed alpha
Helix 12
12
B
275 289Right-handed alpha
Helix 13
13
B
320 329Right-handed alpha
Helix 14
14
B
348 360Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2HJV. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 270first strand
Strand 2
A
293 296parallel
Strand 3
A
243 246parallel
Strand 4
A
311 314parallel
Strand 5
A
338 344parallel
Strand 6
A
215 221parallel
Strand 7
A
364 365parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 269first strand
Strand 2
B
293 296parallel
Strand 3
B
243 246parallel
Strand 4
B
311 314parallel
Strand 5
B
338 344parallel
Strand 6
B
215 221parallel
Strand 7
B
364 365parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il