Analysis of interatomic Contacts of Structural Units in PDB entry:
2HMC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HMC entry

There is 1 chain in PDB entry 2HMC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3LYS 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2HMC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 38Right-handed alpha
Helix 2
2
A
47 55Right-handed 310
Helix 3
3
A
56 70Right-handed alpha
Helix 4
4
A
82 97Right-handed alpha
Helix 5
5
A
113 128Right-handed alpha
Helix 6
6
A
138 142Right-handed 310
Helix 7
7
A
146 157Right-handed alpha
Helix 8
8
A
168 179Right-handed alpha
Helix 9
9
A
192 194Right-handed 310
Helix 10
10
A
195 203Right-handed alpha
Helix 11
11
A
211 215Right-handed 310
Helix 12
12
A
216 231Right-handed alpha
Helix 13
13
A
234 248Right-handed alpha
Helix 14
14
A
248 254Right-handed alpha
Helix 15
15
A
255 257Right-handed 310
Helix 16
16
A
259 271Right-handed alpha
Helix 17
17
A
273 277Right-handed 310
Helix 18
18
A
287 310Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2HMC.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 11first strand
Strand 2
A
207 210parallel
Strand 3
A
187 190parallel
Strand 4
A
160 165parallel
Strand 5
A
133 137parallel
Strand 6
A
100 103parallel
Strand 7
A
74 77parallel
Strand 8
A
43 45parallel
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