Analysis of interatomic Contacts of Structural Units in PDB entry:
2HN2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HN2 entry

There are 5 chains in PDB entry 2HN2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1009LYS 1349
B
 LYS 2009LYS 2349
C
 LYS 3009LYS 3349
D
 LYS 4009LYS 4349
E
 LYS 5009LYS 5349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 50 helices in PDB entry 2HN2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1047 1055Right-handed 310
Helix 2
2
A
1069 1080Right-handed alpha
Helix 3
3
A
1083 1092Right-handed alpha
Helix 4
4
A
1147 1156Right-handed alpha
Helix 5
5
A
1166 1201Right-handed alpha
Helix 6
6
A
1206 1238Right-handed alpha
Helix 7
7
A
1243 1272Right-handed alpha
Helix 8
8
A
1275 1297Right-handed alpha
Helix 9
9
A
1303 1311Right-handed alpha
Helix 10
10
A
1326 1345Right-handed alpha
Helix 11
11
B
2047 2055Right-handed 310
Helix 12
12
B
2069 2080Right-handed alpha
Helix 13
13
B
2083 2092Right-handed alpha
Helix 14
14
B
2147 2156Right-handed alpha
Helix 15
15
B
2166 2201Right-handed alpha
Helix 16
16
B
2206 2238Right-handed alpha
Helix 17
17
B
2243 2272Right-handed alpha
Helix 18
18
B
2275 2297Right-handed alpha
Helix 19
19
B
2303 2311Right-handed alpha
Helix 20
20
B
2326 2345Right-handed alpha
Helix 21
21
C
3047 3055Right-handed 310
Helix 22
22
C
3069 3080Right-handed alpha
Helix 23
23
C
3083 3092Right-handed alpha
Helix 24
24
C
3147 3156Right-handed alpha
Helix 25
25
C
3166 3201Right-handed alpha
Helix 26
26
C
3206 3238Right-handed alpha
Helix 27
27
C
3243 3272Right-handed alpha
Helix 28
28
C
3275 3297Right-handed alpha
Helix 29
29
C
3303 3311Right-handed alpha
Helix 30
30
C
3326 3345Right-handed alpha
Helix 31
31
D
4047 4055Right-handed 310
Helix 32
32
D
4069 4080Right-handed alpha
Helix 33
33
D
4083 4092Right-handed alpha
Helix 34
34
D
4147 4156Right-handed alpha
Helix 35
35
D
4166 4201Right-handed alpha
Helix 36
36
D
4206 4238Right-handed alpha
Helix 37
37
D
4243 4272Right-handed alpha
Helix 38
38
D
4275 4297Right-handed alpha
Helix 39
39
D
4303 4311Right-handed alpha
Helix 40
40
D
4326 4345Right-handed alpha
Helix 41
41
E
5047 5055Right-handed 310
Helix 42
42
E
5069 5080Right-handed alpha
Helix 43
43
E
5083 5092Right-handed alpha
Helix 44
44
E
5147 5156Right-handed alpha
Helix 45
45
E
5166 5201Right-handed alpha
Helix 46
46
E
5206 5238Right-handed alpha
Helix 47
47
E
5243 5272Right-handed alpha
Helix 48
48
E
5275 5297Right-handed alpha
Helix 49
49
E
5303 5311Right-handed alpha
Helix 50
50
E
5326 5345Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 2HN2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1042 1044first strand
Strand 2
A
1028 1031anti-parallel
Strand 3
A
1062 1065anti-parallel
Strand 4
A
1135 1140parallel
Strand 5
A
1121 1132anti-parallel
Strand 6
A
1106 1116anti-parallel
Strand 7
A
1098 1101anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2042 2044first strand
Strand 2
B
2028 2031anti-parallel
Strand 3
B
2062 2065anti-parallel
Strand 4
B
2135 2140parallel
Strand 5
B
2121 2132anti-parallel
Strand 6
B
2106 2116anti-parallel
Strand 7
B
2098 2101anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3042 3044first strand
Strand 2
C
3028 3031anti-parallel
Strand 3
C
3062 3065anti-parallel
Strand 4
C
3135 3140parallel
Strand 5
C
3121 3132anti-parallel
Strand 6
C
3106 3116anti-parallel
Strand 7
C
3098 3101anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4042 4044first strand
Strand 2
D
4028 4031anti-parallel
Strand 3
D
4062 4065anti-parallel
Strand 4
D
4135 4140parallel
Strand 5
D
4121 4132anti-parallel
Strand 6
D
4106 4116anti-parallel
Strand 7
D
4098 4101anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5042 5044first strand
Strand 2
E
5028 5031anti-parallel
Strand 3
E
5062 5065anti-parallel
Strand 4
E
5135 5140parallel
Strand 5
E
5121 5132anti-parallel
Strand 6
E
5106 5116anti-parallel
Strand 7
E
5098 5101anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il