Analysis of interatomic Contacts of Structural Units in PDB entry:
2HNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HNH entry

There is 1 chain in PDB entry 2HNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 910
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 2HNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
23 34Right-handed alpha
Helix 3
3
A
49 61Right-handed alpha
Helix 4
4
A
90 108Right-handed alpha
Helix 5
5
A
119 124Right-handed alpha
Helix 6
6
A
133 136Right-handed 310
Helix 7
7
A
137 146Right-handed alpha
Helix 8
8
A
147 162Right-handed alpha
Helix 9
9
A
177 193Right-handed alpha
Helix 10
10
A
206 208Right-handed 310
Helix 11
11
A
209 222Right-handed alpha
Helix 12
12
A
242 250Right-handed alpha
Helix 13
13
A
253 267Right-handed alpha
Helix 14
14
A
287 308Right-handed alpha
Helix 15
15
A
310 318Right-handed alpha
Helix 16
16
A
318 335Right-handed alpha
Helix 17
17
A
337 354Right-handed alpha
Helix 18
18
A
364 367Right-handed 310
Helix 19
19
A
368 374Right-handed alpha
Helix 20
20
A
387 391Right-handed 310
Helix 21
21
A
407 409Right-handed 310
Helix 22
22
A
410 423Right-handed alpha
Helix 23
23
A
437 449Right-handed alpha
Helix 24
24
A
452 461Right-handed alpha
Helix 25
25
A
470 478Right-handed alpha
Helix 26
26
A
479 488Right-handed alpha
Helix 27
27
A
488 502Right-handed alpha
Helix 28
28
A
521 525Right-handed 310
Helix 29
29
A
542 549Right-handed alpha
Helix 30
30
A
560 575Right-handed alpha
Helix 31
31
A
585 589Right-handed 310
Helix 32
32
A
593 602Right-handed alpha
Helix 33
33
A
613 624Right-handed alpha
Helix 34
34
A
627 638Right-handed alpha
Helix 35
35
A
639 644Right-handed alpha
Helix 36
36
A
646 656Right-handed alpha
Helix 37
37
A
670 672Right-handed 310
Helix 38
38
A
673 678Right-handed alpha
Helix 39
39
A
679 681Right-handed 310
Helix 40
40
A
686 699Right-handed alpha
Helix 41
41
A
701 715Right-handed alpha
Helix 42
42
A
716 734Right-handed alpha
Helix 43
43
A
737 753Right-handed alpha
Helix 44
44
A
757 778Right-handed alpha
Helix 45
45
A
778 790Right-handed alpha
Helix 46
46
A
793 807Right-handed alpha
Helix 47
47
A
834 838Right-handed 310
Helix 48
48
A
842 855Right-handed alpha
Helix 49
49
A
861 866Right-handed alpha
Helix 50
50
A
875 885Right-handed alpha
Helix 51
51
A
894 900Right-handed alpha
Helix 52
52
A
905 910Right-handed 310
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There are 5 sheets in PDB entry 2HNH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
63 73parallel
Strand 3
A
116 117parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
63 73parallel
Strand 3
A
82 88anti-parallel
Strand 4
A
128 131anti-parallel
Strand 5
A
166 170parallel
Strand 6
A
196 198parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 406first strand
Strand 2
A
552 556parallel
Strand 3
A
514 517anti-parallel
Strand 4
A
427 430anti-parallel
Strand 5
A
538 539parallel
Strand 6
A
528 529anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 435first strand
Strand 2
A
505 508anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
811 812first strand
Strand 2
A
831 832parallel
Strand 3
A
824 825anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il