Analysis of interatomic Contacts of Structural Units in PDB entry:
2HOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HOE entry

There is 1 chain in PDB entry 2HOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 10SER 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2HOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 20Right-handed alpha
Helix 2
2
A
23 32Right-handed alpha
Helix 3
3
A
34 48Right-handed alpha
Helix 4
4
A
72 74Right-handed 310
Helix 5
5
A
111 133Right-handed alpha
Helix 6
6
A
167 177Right-handed alpha
Helix 7
7
A
185 197Right-handed alpha
Helix 8
8
A
232 235Right-handed 310
Helix 9
9
A
247 252Right-handed alpha
Helix 10
10
A
252 264Right-handed alpha
Helix 11
11
A
269 274Right-handed alpha
Helix 12
12
A
276 302Right-handed alpha
Helix 13
13
A
312 314Right-handed 310
Helix 14
14
A
315 331Right-handed alpha
Helix 15
15
A
347 367Right-handed alpha
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There are 5 sheets in PDB entry 2HOE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
66 70anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 105first strand
Strand 2
A
86 93anti-parallel
Strand 3
A
76 82anti-parallel
Strand 4
A
139 144parallel
Strand 5
A
179 184parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
154 155anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 222first strand
Strand 2
A
213 218anti-parallel
Strand 3
A
203 208anti-parallel
Strand 4
A
305 310parallel
Strand 5
A
338 341parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 239first strand
Strand 2
A
244 246anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il