Analysis of interatomic Contacts of Structural Units in PDB entry:
2HQF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HQF entry

There is 1 chain in PDB entry 2HQF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7LYS 1036
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 2HQF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 27Right-handed alpha
Helix 2
2
A
28 30Right-handed 310
Helix 3
3
A
53 61Right-handed alpha
Helix 4
4
A
61 67Right-handed alpha
Helix 5
5
A
101 115Right-handed alpha
Helix 6
6
A
116 118Right-handed 310
Helix 7
7
A
119 125Right-handed alpha
Helix 8
8
A
150 160Right-handed alpha
Helix 9
9
A
189 196Right-handed alpha
Helix 10
10
A
199 211Right-handed alpha
Helix 11
11
A
242 247Right-handed alpha
Helix 12
12
A
262 265Right-handed alpha
Helix 13
13
A
298 312Right-handed alpha
Helix 14
14
A
313 317Right-handed 310
Helix 15
15
A
329 334Right-handed alpha
Helix 16
16
A
334 359Right-handed alpha
Helix 17
17
A
361 385Right-handed alpha
Helix 18
18
A
396 402Right-handed alpha
Helix 19
19
A
403 423Right-handed alpha
Helix 20
20
A
427 435Right-handed alpha
Helix 21
21
A
439 450Right-handed alpha
Helix 22
22
A
453 459Right-handed 310
Helix 23
23
A
471 488Right-handed alpha
Helix 24
24
A
491 496Right-handed alpha
Helix 25
25
A
516 524Right-handed alpha
Helix 26
26
A
527 535Right-handed alpha
Helix 27
27
A
540 556Right-handed alpha
Helix 28
28
A
583 601Right-handed alpha
Helix 29
29
A
643 658Right-handed alpha
Helix 30
30
A
691 707Right-handed alpha
Helix 31
31
A
732 740Right-handed alpha
Helix 32
32
A
742 753Right-handed alpha
Helix 33
33
A
776 780Right-handed 310
Helix 34
34
A
782 786Right-handed 310
Helix 35
35
A
837 848Right-handed alpha
Helix 36
36
A
872 877Right-handed alpha
Helix 37
37
A
901 903Right-handed 310
Helix 38
38
A
904 918Right-handed alpha
Helix 39
39
A
924 937Right-handed alpha
Helix 40
40
A
938 953Right-handed alpha
Helix 41
41
A
963 968Right-handed alpha
Helix 42
42
A
971 986Right-handed alpha
Helix 43
43
A
986 991Right-handed alpha
Helix 44
44
A
998 1020Right-handed alpha
Helix 45
45
A
1022 1027Right-handed alpha
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There are 10 sheets in PDB entry 2HQF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
87 93anti-parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
128 131anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
284 293anti-parallel
Strand 3
A
136 144anti-parallel
Strand 4
A
321 328anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
284 293anti-parallel
Strand 3
A
278 281anti-parallel
Strand 4
A
606 613anti-parallel
Strand 5
A
624 631anti-parallel
Strand 6
A
571 577anti-parallel
Strand 7
A
662 663anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
768 773parallel
Strand 4
A
757 763anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
232 233anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 252first strand
Strand 2
A
260 261anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 718first strand
Strand 2
A
822 829anti-parallel
Strand 3
A
818 819anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 718first strand
Strand 2
A
822 829anti-parallel
Strand 3
A
680 685anti-parallel
Strand 4
A
857 859anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 731first strand
Strand 2
A
805 812anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 792first strand
Strand 2
A
798 800anti-parallel
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