Analysis of interatomic Contacts of Structural Units in PDB entry:
2HRE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HRE entry

There are 4 chains in PDB entry 2HRE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 65LEU 423
B
 ARG 65LEU 423
C
 ARG 65LEU 423
D
 ARG 65LEU 423
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 2HRE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
81 83Right-handed 310
Helix 2
2
A
84 95Right-handed alpha
Helix 3
3
A
103 126Right-handed alpha
Helix 4
4
A
131 151Right-handed alpha
Helix 5
5
A
152 155Right-handed 310
Helix 6
6
A
169 179Right-handed alpha
Helix 7
7
A
198 214Right-handed alpha
Helix 8
8
A
230 246Right-handed alpha
Helix 9
9
A
252 256Right-handed 310
Helix 10
10
A
266 271Right-handed alpha
Helix 11
11
A
275 291Right-handed alpha
Helix 12
12
A
314 324Right-handed alpha
Helix 13
13
A
341 346Right-handed alpha
Helix 14
14
A
354 361Right-handed alpha
Helix 15
15
A
374 392Right-handed alpha
Helix 16
16
A
408 420Right-handed alpha
Helix 17
17
B
81 83Right-handed 310
Helix 18
18
B
84 95Right-handed alpha
Helix 19
19
B
103 125Right-handed alpha
Helix 20
20
B
131 151Right-handed alpha
Helix 21
21
B
152 155Right-handed 310
Helix 22
22
B
169 180Right-handed alpha
Helix 23
23
B
198 214Right-handed alpha
Helix 24
24
B
230 246Right-handed alpha
Helix 25
25
B
252 256Right-handed 310
Helix 26
26
B
266 271Right-handed alpha
Helix 27
27
B
275 291Right-handed alpha
Helix 28
28
B
314 325Right-handed alpha
Helix 29
29
B
341 346Right-handed alpha
Helix 30
30
B
354 361Right-handed alpha
Helix 31
31
B
374 392Right-handed alpha
Helix 32
32
B
397 401Right-handed 310
Helix 33
33
B
408 420Right-handed alpha
Helix 34
34
C
81 83Right-handed 310
Helix 35
35
C
84 95Right-handed alpha
Helix 36
36
C
103 126Right-handed alpha
Helix 37
37
C
131 151Right-handed alpha
Helix 38
38
C
152 155Right-handed 310
Helix 39
39
C
169 180Right-handed alpha
Helix 40
40
C
198 214Right-handed alpha
Helix 41
41
C
230 246Right-handed alpha
Helix 42
42
C
252 256Right-handed 310
Helix 43
43
C
266 271Right-handed alpha
Helix 44
44
C
275 291Right-handed alpha
Helix 45
45
C
314 324Right-handed alpha
Helix 46
46
C
341 346Right-handed alpha
Helix 47
47
C
354 361Right-handed alpha
Helix 48
48
C
374 392Right-handed alpha
Helix 49
49
C
397 401Right-handed 310
Helix 50
50
C
410 420Right-handed alpha
Helix 51
51
D
81 83Right-handed 310
Helix 52
52
D
84 95Right-handed alpha
Helix 53
53
D
103 125Right-handed alpha
Helix 54
54
D
131 151Right-handed alpha
Helix 55
55
D
152 155Right-handed 310
Helix 56
56
D
169 180Right-handed alpha
Helix 57
57
D
198 214Right-handed alpha
Helix 58
58
D
230 246Right-handed alpha
Helix 59
59
D
266 271Right-handed alpha
Helix 60
60
D
275 291Right-handed alpha
Helix 61
61
D
314 324Right-handed alpha
Helix 62
62
D
341 346Right-handed alpha
Helix 63
63
D
354 361Right-handed alpha
Helix 64
64
D
374 392Right-handed alpha
Helix 65
65
D
397 401Right-handed 310
Helix 66
66
D
409 419Right-handed alpha
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There are 8 sheets in PDB entry 2HRE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 163first strand
Strand 2
A
69 75parallel
Strand 3
A
184 189parallel
Strand 4
A
220 224parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 302first strand
Strand 2
A
257 263parallel
Strand 3
A
329 333parallel
Strand 4
A
364 367parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 163first strand
Strand 2
B
69 75parallel
Strand 3
B
184 189parallel
Strand 4
B
220 224parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 302first strand
Strand 2
B
257 263parallel
Strand 3
B
329 333parallel
Strand 4
B
364 367parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 163first strand
Strand 2
C
69 75parallel
Strand 3
C
184 189parallel
Strand 4
C
220 224parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
297 302first strand
Strand 2
C
257 263parallel
Strand 3
C
329 333parallel
Strand 4
C
364 367parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
157 163first strand
Strand 2
D
69 75parallel
Strand 3
D
184 189parallel
Strand 4
D
220 224parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
297 302first strand
Strand 2
D
257 263parallel
Strand 3
D
329 333parallel
Strand 4
D
364 367parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il