Analysis of interatomic Contacts of Structural Units in PDB entry:
2HS8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HS8 entry

There are 2 chains in PDB entry 2HS8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7LEU 384
B
 PRO 11LEU 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2HS8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 14Right-handed 310
Helix 2
2
A
37 41Right-handed 310
Helix 3
3
A
43 54Right-handed alpha
Helix 4
4
A
82 98Right-handed alpha
Helix 5
5
A
115 123Right-handed 310
Helix 6
6
A
156 177Right-handed alpha
Helix 7
7
A
190 197Right-handed alpha
Helix 8
8
A
210 215Right-handed alpha
Helix 9
9
A
215 230Right-handed alpha
Helix 10
10
A
243 247Right-handed 310
Helix 11
11
A
251 271Right-handed alpha
Helix 12
12
A
295 312Right-handed alpha
Helix 13
13
A
323 333Right-handed alpha
Helix 14
14
A
342 348Right-handed alpha
Helix 15
15
A
350 358Right-handed alpha
Helix 16
16
A
365 369Right-handed 310
Helix 17
17
B
37 41Right-handed 310
Helix 18
18
B
43 54Right-handed alpha
Helix 19
19
B
82 98Right-handed alpha
Helix 20
20
B
115 123Right-handed 310
Helix 21
21
B
156 177Right-handed alpha
Helix 22
22
B
190 197Right-handed alpha
Helix 23
23
B
210 215Right-handed alpha
Helix 24
24
B
215 230Right-handed alpha
Helix 25
25
B
243 247Right-handed 310
Helix 26
26
B
251 271Right-handed alpha
Helix 27
27
B
295 312Right-handed alpha
Helix 28
28
B
323 333Right-handed alpha
Helix 29
29
B
342 348Right-handed alpha
Helix 30
30
B
350 358Right-handed alpha
Helix 31
31
B
365 369Right-handed 310
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There are 7 sheets in PDB entry 2HS8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
21 23anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
59 66parallel
Strand 3
A
102 108parallel
Strand 4
A
181 186parallel
Strand 5
A
234 238parallel
Strand 6
A
276 280parallel
Strand 7
A
316 319parallel
Strand 8
A
338 341parallel
Strand 9
A
27 29parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
153 154parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
21 23anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
59 66parallel
Strand 3
B
102 108parallel
Strand 4
B
181 186parallel
Strand 5
B
234 238parallel
Strand 6
B
276 280parallel
Strand 7
B
316 319parallel
Strand 8
B
338 341parallel
Strand 9
B
27 29parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
153 154parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
146 147anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il