Analysis of interatomic Contacts of Structural Units in PDB entry:
2HUP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HUP entry

There are 2 chains in PDB entry 2HUP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 15GLY 186
B
 TYR 15HIS 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2HUP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 41Right-handed alpha
Helix 2
2
A
77 79Right-handed 310
Helix 3
3
A
80 89Right-handed alpha
Helix 4
4
A
102 108Right-handed alpha
Helix 5
5
A
108 120Right-handed alpha
Helix 6
6
A
135 139Right-handed 310
Helix 7
7
A
142 153Right-handed alpha
Helix 8
8
A
168 184Right-handed alpha
Helix 9
9
B
30 41Right-handed alpha
Helix 10
10
B
77 79Right-handed 310
Helix 11
11
B
80 89Right-handed alpha
Helix 12
12
B
102 120Right-handed alpha
Helix 13
13
B
132 139Right-handed 310
Helix 14
14
B
142 153Right-handed alpha
Helix 15
15
B
168 184Right-handed alpha
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There are 2 sheets in PDB entry 2HUP. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 62first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
17 25parallel
Strand 4
A
93 99parallel
Strand 5
A
125 131parallel
Strand 6
A
157 160parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 60first strand
Strand 2
B
67 72anti-parallel
Strand 3
B
17 25parallel
Strand 4
B
93 99parallel
Strand 5
B
125 131parallel
Strand 6
B
158 160parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il