Analysis of interatomic Contacts of Structural Units in PDB entry:
2HVM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HVM entry

There is 1 chain in PDB entry 2HVM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1VAL 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2HVM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
16 22Right-handed alpha
Helix 3
3
A
47 49Right-handed 310
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
58 70Right-handed 310
Helix 6
6
A
90 103Right-handed alpha
Helix 7
7
A
134 147Right-handed alpha
Helix 8
8
A
167 172Right-handed alpha
Helix 9
9
A
186 188Right-handed 310
Helix 10
10
A
196 208Right-handed alpha
Helix 11
11
A
222 224Right-handed 310
Helix 12
12
A
232 237Right-handed alpha
Helix 13
13
A
240 245Right-handed alpha
Helix 14
14
A
257 263Right-handed alpha
Helix 15
15
A
265 269Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2HVM.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 155first strand
Strand 2
A
121 125parallel
Strand 3
A
73 79parallel
Strand 4
A
27 30parallel
Strand 5
A
2 7parallel
Strand 6
A
249 255parallel
Strand 7
A
213 219parallel
Strand 8
A
177 181parallel
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