Analysis of interatomic Contacts of Structural Units in PDB entry:
2HW6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HW6 entry

There are 2 chains in PDB entry 2HW6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 39GLY 335
B
 LEU 40GLN 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 2HW6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 46Right-handed 310
Helix 2
2
A
86 102Right-handed alpha
Helix 3
3
A
131 140Right-handed alpha
Helix 4
4
A
143 164Right-handed alpha
Helix 5
5
A
172 174Right-handed 310
Helix 6
6
A
235 256Right-handed alpha
Helix 7
7
A
295 300Right-handed alpha
Helix 8
8
A
303 314Right-handed alpha
Helix 9
9
A
323 330Right-handed alpha
Helix 10
10
B
43 46Right-handed 310
Helix 11
11
B
86 100Right-handed alpha
Helix 12
12
B
133 138Right-handed alpha
Helix 13
13
B
143 164Right-handed alpha
Helix 14
14
B
172 174Right-handed 310
Helix 15
15
B
235 256Right-handed alpha
Helix 16
16
B
303 312Right-handed alpha
Helix 17
17
B
323 328Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 2HW6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 57first strand
Strand 2
A
61 68anti-parallel
Strand 3
A
74 81anti-parallel
Strand 4
A
119 125anti-parallel
Strand 5
A
110 115anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
187 189anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
61 68anti-parallel
Strand 3
B
56 57anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
61 68anti-parallel
Strand 3
B
74 81anti-parallel
Strand 4
B
119 125anti-parallel
Strand 5
B
110 115anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
176 178anti-parallel
Strand 3
B
188 189anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il