Analysis of interatomic Contacts of Structural Units in PDB entry:
2I00

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2I00 entry

There are 6 chains in PDB entry 2I00 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 10	PHE 406
B	THR 11	PHE 406
C	GLN 9	PHE 406
D	THR 11	PHE 406
E	THR 11	PHE 406
F	GLN 9	PHE 406

There are114 helices in PDB entry 2I00. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	18	Right-handed 310
Helix 2	2	A	19	31	Right-handed alpha
Helix 3	3	A	34	41	Right-handed alpha
Helix 4	4	A	45	52	Right-handed alpha
Helix 5	5	A	53	60	Right-handed alpha
Helix 6	6	A	101	104	Right-handed 310
Helix 7	7	A	107	123	Right-handed alpha
Helix 8	8	A	134	141	Right-handed alpha
Helix 9	9	A	157	159	Right-handed 310
Helix 10	10	A	176	190	Right-handed alpha
Helix 11	11	A	197	205	Right-handed alpha
Helix 12	12	A	209	213	Right-handed 310
Helix 13	13	A	247	260	Right-handed alpha
Helix 14	14	A	261	265	Right-handed 310
Helix 15	15	A	278	282	Right-handed 310
Helix 16	16	A	301	309	Right-handed alpha
Helix 17	17	A	327	331	Right-handed 310
Helix 18	18	A	359	368	Right-handed alpha
Helix 19	19	A	371	378	Right-handed alpha
Helix 20	20	A	384	395	Right-handed alpha
Helix 21	21	B	16	18	Right-handed 310
Helix 22	22	B	19	31	Right-handed alpha
Helix 23	23	B	34	41	Right-handed alpha
Helix 24	24	B	53	60	Right-handed alpha
Helix 25	25	B	101	104	Right-handed 310
Helix 26	26	B	107	123	Right-handed alpha
Helix 27	27	B	134	141	Right-handed alpha
Helix 28	28	B	157	159	Right-handed 310
Helix 29	29	B	176	189	Right-handed alpha
Helix 30	30	B	197	205	Right-handed alpha
Helix 31	31	B	209	213	Right-handed 310
Helix 32	32	B	247	260	Right-handed alpha
Helix 33	33	B	261	265	Right-handed 310
Helix 34	34	B	278	282	Right-handed 310
Helix 35	35	B	301	308	Right-handed alpha
Helix 36	36	B	327	331	Right-handed 310
Helix 37	37	B	359	368	Right-handed alpha
Helix 38	38	B	371	378	Right-handed alpha
Helix 39	39	B	384	395	Right-handed alpha
Helix 40	40	C	16	18	Right-handed 310
Helix 41	41	C	19	31	Right-handed alpha
Helix 42	42	C	34	41	Right-handed alpha
Helix 43	43	C	45	52	Right-handed alpha
Helix 44	44	C	53	59	Right-handed alpha
Helix 45	45	C	101	104	Right-handed 310
Helix 46	46	C	107	123	Right-handed alpha
Helix 47	47	C	134	141	Right-handed alpha
Helix 48	48	C	157	159	Right-handed 310
Helix 49	49	C	176	189	Right-handed alpha
Helix 50	50	C	197	205	Right-handed alpha
Helix 51	51	C	209	213	Right-handed 310
Helix 52	52	C	247	260	Right-handed alpha
Helix 53	53	C	261	265	Right-handed 310
Helix 54	54	C	278	282	Right-handed 310
Helix 55	55	C	301	309	Right-handed alpha
Helix 56	56	C	327	331	Right-handed 310
Helix 57	57	C	359	368	Right-handed alpha
Helix 58	58	C	371	378	Right-handed alpha
Helix 59	59	C	384	395	Right-handed alpha
Helix 60	60	D	19	31	Right-handed alpha
Helix 61	61	D	34	41	Right-handed alpha
Helix 62	62	D	45	52	Right-handed alpha
Helix 63	63	D	53	58	Right-handed alpha
Helix 64	64	D	107	123	Right-handed alpha
Helix 65	65	D	134	141	Right-handed alpha
Helix 66	66	D	157	159	Right-handed 310
Helix 67	67	D	176	189	Right-handed alpha
Helix 68	68	D	197	205	Right-handed alpha
Helix 69	69	D	209	213	Right-handed 310
Helix 70	70	D	247	260	Right-handed alpha
Helix 71	71	D	261	265	Right-handed 310
Helix 72	72	D	278	282	Right-handed 310
Helix 73	73	D	301	308	Right-handed alpha
Helix 74	74	D	327	331	Right-handed 310
Helix 75	75	D	359	367	Right-handed alpha
Helix 76	76	D	371	378	Right-handed alpha
Helix 77	77	D	384	395	Right-handed alpha
Helix 78	78	E	16	18	Right-handed 310
Helix 79	79	E	19	31	Right-handed alpha
Helix 80	80	E	34	41	Right-handed alpha
Helix 81	81	E	45	52	Right-handed alpha
Helix 82	82	E	53	60	Right-handed alpha
Helix 83	83	E	101	104	Right-handed 310
Helix 84	84	E	107	123	Right-handed alpha
Helix 85	85	E	134	141	Right-handed alpha
Helix 86	86	E	157	159	Right-handed 310
Helix 87	87	E	176	189	Right-handed alpha
Helix 88	88	E	197	206	Right-handed alpha
Helix 89	89	E	247	260	Right-handed alpha
Helix 90	90	E	261	265	Right-handed 310
Helix 91	91	E	278	282	Right-handed 310
Helix 92	92	E	301	308	Right-handed alpha
Helix 93	93	E	327	331	Right-handed 310
Helix 94	94	E	359	367	Right-handed alpha
Helix 95	95	E	371	378	Right-handed alpha
Helix 96	96	E	384	395	Right-handed alpha
Helix 97	97	F	16	18	Right-handed 310
Helix 98	98	F	19	31	Right-handed alpha
Helix 99	99	F	34	41	Right-handed alpha
Helix 100	100	F	45	52	Right-handed alpha
Helix 101	101	F	53	59	Right-handed alpha
Helix 102	102	F	107	123	Right-handed alpha
Helix 103	103	F	134	141	Right-handed alpha
Helix 104	104	F	157	159	Right-handed 310
Helix 105	105	F	176	187	Right-handed alpha
Helix 106	106	F	197	205	Right-handed alpha
Helix 107	107	F	247	260	Right-handed alpha
Helix 108	108	F	261	265	Right-handed 310
Helix 109	109	F	278	282	Right-handed 310
Helix 110	110	F	301	309	Right-handed alpha
Helix 111	111	F	327	331	Right-handed 310
Helix 112	112	F	359	368	Right-handed alpha
Helix 113	113	F	371	378	Right-handed alpha
Helix 114	114	F	384	395	Right-handed alpha

There are 14 sheets in PDB entry 2I00. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	14	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	70	84	anti-parallel
Strand 4	A	87	99	anti-parallel
Strand 5	A	127	130	parallel
Strand 6	A	289	299	anti-parallel
Strand 7	A	144	155	anti-parallel
Strand 8	A	267	272	anti-parallel
Strand 9	A	237	245	parallel
Strand 10	A	225	234	anti-parallel
Strand 11	A	214	219	anti-parallel
Strand 12	A	168	172	anti-parallel

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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	14	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	70	84	anti-parallel
Strand 4	A	87	99	anti-parallel
Strand 5	A	127	130	parallel
Strand 6	A	289	299	anti-parallel
Strand 7	B	289	299	anti-parallel
Strand 8	B	127	130	anti-parallel
Strand 9	B	87	99	parallel
Strand 10	B	70	84	anti-parallel
Strand 11	B	194	195	anti-parallel
Strand 12	B	70	84	anti-parallel
Strand 13	B	12	14	first strand
Strand 14	B	61	67	anti-parallel

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There are 13 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	14	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	70	84	anti-parallel
Strand 4	A	87	99	anti-parallel
Strand 5	A	127	130	parallel
Strand 6	A	289	299	anti-parallel
Strand 7	B	289	299	anti-parallel
Strand 8	B	144	155	anti-parallel
Strand 9	B	267	272	anti-parallel
Strand 10	B	237	245	parallel
Strand 11	B	225	234	anti-parallel
Strand 12	B	214	219	anti-parallel
Strand 13	B	168	172	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	347	first strand
Strand 2	A	332	338	anti-parallel
Strand 3	A	318	323	anti-parallel
Strand 4	A	353	358	parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	347	first strand
Strand 2	B	332	338	anti-parallel
Strand 3	B	318	323	anti-parallel
Strand 4	B	354	358	parallel

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There are 12 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	14	first strand
Strand 2	C	61	67	anti-parallel
Strand 3	C	70	84	anti-parallel
Strand 4	C	87	99	anti-parallel
Strand 5	C	127	130	parallel
Strand 6	C	288	299	anti-parallel
Strand 7	D	289	299	anti-parallel
Strand 8	D	127	130	anti-parallel
Strand 9	D	87	99	parallel
Strand 10	D	70	84	anti-parallel
Strand 11	D	61	67	anti-parallel
Strand 12	D	12	14	anti-parallel

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There are 14 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	172	first strand
Strand 2	C	214	219	anti-parallel
Strand 3	C	225	234	anti-parallel
Strand 4	C	237	245	anti-parallel
Strand 5	C	267	272	parallel
Strand 6	C	144	155	anti-parallel
Strand 7	C	288	299	anti-parallel
Strand 8	D	289	299	anti-parallel
Strand 9	D	144	155	anti-parallel
Strand 10	D	267	272	anti-parallel
Strand 11	D	237	245	parallel
Strand 12	D	225	234	anti-parallel
Strand 13	D	214	219	anti-parallel
Strand 14	D	168	172	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	344	347	first strand
Strand 2	C	332	338	anti-parallel
Strand 3	C	318	323	anti-parallel
Strand 4	C	353	358	parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	344	347	first strand
Strand 2	D	332	338	anti-parallel
Strand 3	D	318	323	anti-parallel
Strand 4	D	354	358	parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	14	first strand
Strand 2	E	61	67	anti-parallel
Strand 3	E	70	84	anti-parallel
Strand 4	E	87	99	anti-parallel

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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	130	first strand
Strand 2	E	288	299	anti-parallel
Strand 3	F	289	299	anti-parallel
Strand 4	F	127	130	anti-parallel
Strand 5	F	87	99	parallel
Strand 6	F	71	84	anti-parallel
Strand 7	F	61	66	anti-parallel
Strand 8	F	11	14	anti-parallel

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There are 14 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	172	first strand
Strand 2	E	214	219	anti-parallel
Strand 3	E	225	233	anti-parallel
Strand 4	E	237	245	anti-parallel
Strand 5	E	267	272	parallel
Strand 6	E	144	155	anti-parallel
Strand 7	E	288	299	anti-parallel
Strand 8	F	289	299	anti-parallel
Strand 9	F	144	155	anti-parallel
Strand 10	F	267	272	anti-parallel
Strand 11	F	237	245	parallel
Strand 12	F	225	234	anti-parallel
Strand 13	F	214	219	anti-parallel
Strand 14	F	168	172	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	344	347	first strand
Strand 2	E	332	338	anti-parallel
Strand 3	E	318	323	anti-parallel
Strand 4	E	353	358	parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	344	347	first strand
Strand 2	F	332	338	anti-parallel
Strand 3	F	318	323	anti-parallel
Strand 4	F	354	358	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2I00

Analysis of interatomic Contacts of Structural Units in PDB entry:
2I00