Analysis of interatomic Contacts of Structural Units in PDB entry:
2I0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2I0F entry

There are 5 chains in PDB entry 2I0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11ALA 157
B
 ALA 12ALA 157
C
 ASP 11ALA 157
D
 ALA 12ALA 157
E
 ASP 11ALA 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2I0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 41Right-handed alpha
Helix 2
2
A
52 54Right-handed 310
Helix 3
3
A
55 69Right-handed alpha
Helix 4
4
A
91 109Right-handed alpha
Helix 5
5
A
122 131Right-handed alpha
Helix 6
6
A
136 155Right-handed alpha
Helix 7
7
B
23 41Right-handed alpha
Helix 8
8
B
52 54Right-handed 310
Helix 9
9
B
55 69Right-handed alpha
Helix 10
10
B
91 109Right-handed alpha
Helix 11
11
B
122 131Right-handed alpha
Helix 12
12
B
136 155Right-handed alpha
Helix 13
13
C
23 42Right-handed alpha
Helix 14
14
C
52 54Right-handed 310
Helix 15
15
C
55 68Right-handed alpha
Helix 16
16
C
91 109Right-handed alpha
Helix 17
17
C
122 131Right-handed alpha
Helix 18
18
C
136 155Right-handed alpha
Helix 19
19
D
23 41Right-handed alpha
Helix 20
20
D
52 54Right-handed 310
Helix 21
21
D
55 69Right-handed alpha
Helix 22
22
D
91 109Right-handed alpha
Helix 23
23
D
122 131Right-handed alpha
Helix 24
24
D
136 156Right-handed alpha
Helix 25
25
E
23 42Right-handed alpha
Helix 26
26
E
52 54Right-handed 310
Helix 27
27
E
55 68Right-handed alpha
Helix 28
28
E
91 109Right-handed alpha
Helix 29
29
E
122 131Right-handed alpha
Helix 30
30
E
136 156Right-handed alpha
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There are 5 sheets in PDB entry 2I0F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 50first strand
Strand 2
A
14 20parallel
Strand 3
A
76 84parallel
Strand 4
A
113 120parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 50first strand
Strand 2
B
14 20parallel
Strand 3
B
76 84parallel
Strand 4
B
113 120parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 50first strand
Strand 2
C
15 20parallel
Strand 3
C
76 84parallel
Strand 4
C
113 120parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 50first strand
Strand 2
D
14 20parallel
Strand 3
D
76 82parallel
Strand 4
D
113 118parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
44 50first strand
Strand 2
E
14 20parallel
Strand 3
E
76 84parallel
Strand 4
E
113 120parallel
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