Analysis of interatomic Contacts of Structural Units in PDB entry:
2I0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2I0O entry

There is 1 chain in PDB entry 2I0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LYS 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 2I0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 5Right-handed 310
Helix 2
2
A
62 79Right-handed alpha
Helix 3
3
A
79 84Right-handed alpha
Helix 4
4
A
86 102Right-handed alpha
Helix 5
6
A
447 457Right-handed alpha
Helix 6
7
A
466 470Right-handed 310
Helix 7
8
A
480 483Right-handed 310
Helix 8
9
A
489 493Right-handed 310
Helix 9
10
A
517 522Right-handed alpha
Helix 10
11
A
525 538Right-handed alpha
Helix 11
12
A
543 556Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2I0O. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 18first strand
Strand 2
A
22 31anti-parallel
Strand 3
A
570 577anti-parallel
Strand 4
A
510 516anti-parallel
Strand 5
A
427 432anti-parallel
Strand 6
A
435 438anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 47first strand
Strand 2
A
50 57anti-parallel
Strand 3
A
405 414anti-parallel
Strand 4
A
477 478anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 47first strand
Strand 2
A
50 57anti-parallel
Strand 3
A
405 414anti-parallel
Strand 4
A
417 423anti-parallel
Strand 5
A
500 505anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il