Analysis of interatomic Contacts of Structural Units in PDB entry:
2I0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2I0Z entry

There is 1 chain in PDB entry 2I0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2I0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
38 44Right-handed alpha
Helix 3
3
A
45 48Right-handed 310
Helix 4
4
A
56 63Right-handed alpha
Helix 5
5
A
67 70Right-handed 310
Helix 6
6
A
71 78Right-handed alpha
Helix 7
7
A
79 90Right-handed alpha
Helix 8
8
A
108 123Right-handed alpha
Helix 9
9
A
168 172Right-handed 310
Helix 10
10
A
176 184Right-handed alpha
Helix 11
11
A
202 207Right-handed alpha
Helix 12
12
A
246 264Right-handed alpha
Helix 13
13
A
279 292Right-handed alpha
Helix 14
14
A
298 303Right-handed alpha
Helix 15
15
A
308 319Right-handed alpha
Helix 16
16
A
326 330Right-handed 310
Helix 17
17
A
331 344Right-handed alpha
Helix 18
18
A
354 358Right-handed 310
Helix 19
19
A
367 370Right-handed 310
Helix 20
20
A
387 390Right-handed 310
Helix 21
21
A
398 420Right-handed alpha
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There are 5 sheets in PDB entry 2I0Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
28 31parallel
Strand 3
A
5 8parallel
Strand 4
A
159 161parallel
Strand 5
A
383 385parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
101 104anti-parallel
Strand 3
A
94 96anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 139first strand
Strand 2
A
142 148anti-parallel
Strand 3
A
153 155anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 193first strand
Strand 2
A
361 365anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 349first strand
Strand 2
A
268 273anti-parallel
Strand 3
A
214 222anti-parallel
Strand 4
A
230 239anti-parallel
Strand 5
A
243 245anti-parallel
Strand 6
A
198 199anti-parallel
Strand 7
A
351 352anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il