Analysis of interatomic Contacts of Structural Units in PDB entry:
2I14

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2I14 entry

There are 6 chains in PDB entry 2I14 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 389
B	MET 401	ILE 789
C	MET 1001	ILE 1389
D	MET 1401	ILE 1789
E	MET 2001	ILE 2389
F	MET 2401	ILE 2789

There are114 helices in PDB entry 2I14. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	8	15	Right-handed alpha
Helix 2	2	A	19	32	Right-handed alpha
Helix 3	3	A	47	51	Right-handed 310
Helix 4	4	A	58	67	Right-handed alpha
Helix 5	5	A	95	99	Right-handed alpha
Helix 6	6	A	101	126	Right-handed alpha
Helix 7	7	A	135	139	Right-handed 310
Helix 8	8	A	140	142	Right-handed 310
Helix 9	9	A	143	154	Right-handed alpha
Helix 10	10	A	161	169	Right-handed alpha
Helix 11	11	A	177	185	Right-handed alpha
Helix 12	12	A	186	198	Right-handed alpha
Helix 13	13	A	213	223	Right-handed alpha
Helix 14	14	A	225	229	Right-handed 310
Helix 15	15	A	243	258	Right-handed alpha
Helix 16	16	A	272	278	Right-handed alpha
Helix 17	17	A	279	283	Right-handed 310
Helix 18	18	A	289	294	Right-handed alpha
Helix 19	19	A	370	385	Right-handed alpha
Helix 20	20	B	408	415	Right-handed alpha
Helix 21	21	B	419	432	Right-handed alpha
Helix 22	22	B	447	451	Right-handed 310
Helix 23	23	B	458	467	Right-handed alpha
Helix 24	24	B	495	499	Right-handed alpha
Helix 25	25	B	501	526	Right-handed alpha
Helix 26	26	B	535	539	Right-handed 310
Helix 27	27	B	540	542	Right-handed 310
Helix 28	28	B	543	555	Right-handed alpha
Helix 29	29	B	561	569	Right-handed alpha
Helix 30	30	B	577	585	Right-handed alpha
Helix 31	31	B	586	598	Right-handed alpha
Helix 32	32	B	613	623	Right-handed alpha
Helix 33	33	B	625	629	Right-handed 310
Helix 34	34	B	643	658	Right-handed alpha
Helix 35	35	B	672	678	Right-handed alpha
Helix 36	36	B	679	683	Right-handed 310
Helix 37	37	B	689	694	Right-handed alpha
Helix 38	38	B	770	785	Right-handed alpha
Helix 39	39	C	1008	1015	Right-handed alpha
Helix 40	40	C	1019	1032	Right-handed alpha
Helix 41	41	C	1047	1051	Right-handed 310
Helix 42	42	C	1058	1067	Right-handed alpha
Helix 43	43	C	1095	1099	Right-handed alpha
Helix 44	44	C	1101	1126	Right-handed alpha
Helix 45	45	C	1135	1139	Right-handed 310
Helix 46	46	C	1140	1142	Right-handed 310
Helix 47	47	C	1143	1154	Right-handed alpha
Helix 48	48	C	1161	1169	Right-handed alpha
Helix 49	49	C	1177	1185	Right-handed alpha
Helix 50	50	C	1186	1198	Right-handed alpha
Helix 51	51	C	1213	1223	Right-handed alpha
Helix 52	52	C	1225	1229	Right-handed 310
Helix 53	53	C	1243	1258	Right-handed alpha
Helix 54	54	C	1272	1278	Right-handed alpha
Helix 55	55	C	1279	1283	Right-handed 310
Helix 56	56	C	1289	1294	Right-handed alpha
Helix 57	57	C	1370	1385	Right-handed alpha
Helix 58	58	D	1408	1415	Right-handed alpha
Helix 59	59	D	1419	1432	Right-handed alpha
Helix 60	60	D	1447	1451	Right-handed 310
Helix 61	61	D	1458	1467	Right-handed alpha
Helix 62	62	D	1495	1499	Right-handed alpha
Helix 63	63	D	1501	1526	Right-handed alpha
Helix 64	64	D	1535	1539	Right-handed 310
Helix 65	65	D	1540	1542	Right-handed 310
Helix 66	66	D	1543	1555	Right-handed alpha
Helix 67	67	D	1561	1569	Right-handed alpha
Helix 68	68	D	1577	1585	Right-handed alpha
Helix 69	69	D	1586	1598	Right-handed alpha
Helix 70	70	D	1613	1623	Right-handed alpha
Helix 71	71	D	1625	1629	Right-handed 310
Helix 72	72	D	1643	1658	Right-handed alpha
Helix 73	73	D	1672	1678	Right-handed alpha
Helix 74	74	D	1679	1683	Right-handed 310
Helix 75	75	D	1689	1694	Right-handed alpha
Helix 76	76	D	1770	1785	Right-handed alpha
Helix 77	77	E	2008	2015	Right-handed alpha
Helix 78	78	E	2019	2032	Right-handed alpha
Helix 79	79	E	2047	2051	Right-handed 310
Helix 80	80	E	2058	2067	Right-handed alpha
Helix 81	81	E	2095	2099	Right-handed alpha
Helix 82	82	E	2101	2126	Right-handed alpha
Helix 83	83	E	2135	2139	Right-handed 310
Helix 84	84	E	2140	2142	Right-handed 310
Helix 85	85	E	2143	2155	Right-handed alpha
Helix 86	86	E	2161	2169	Right-handed alpha
Helix 87	87	E	2177	2185	Right-handed alpha
Helix 88	88	E	2186	2198	Right-handed alpha
Helix 89	89	E	2213	2223	Right-handed alpha
Helix 90	90	E	2225	2229	Right-handed 310
Helix 91	91	E	2243	2258	Right-handed alpha
Helix 92	92	E	2272	2278	Right-handed alpha
Helix 93	93	E	2279	2283	Right-handed 310
Helix 94	94	E	2289	2294	Right-handed alpha
Helix 95	95	E	2370	2385	Right-handed alpha
Helix 96	96	F	2408	2415	Right-handed alpha
Helix 97	97	F	2419	2432	Right-handed alpha
Helix 98	98	F	2447	2451	Right-handed 310
Helix 99	99	F	2458	2467	Right-handed alpha
Helix 100	100	F	2495	2499	Right-handed alpha
Helix 101	101	F	2501	2526	Right-handed alpha
Helix 102	102	F	2535	2539	Right-handed 310
Helix 103	103	F	2540	2542	Right-handed 310
Helix 104	104	F	2543	2555	Right-handed alpha
Helix 105	105	F	2561	2569	Right-handed alpha
Helix 106	106	F	2577	2585	Right-handed alpha
Helix 107	107	F	2586	2598	Right-handed alpha
Helix 108	108	F	2613	2623	Right-handed alpha
Helix 109	109	F	2625	2629	Right-handed 310
Helix 110	110	F	2643	2658	Right-handed alpha
Helix 111	111	F	2672	2678	Right-handed alpha
Helix 112	112	F	2679	2683	Right-handed 310
Helix 113	113	F	2689	2694	Right-handed alpha
Helix 114	114	F	2770	2785	Right-handed alpha

There are 24 sheets in PDB entry 2I14. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	311	first strand
Strand 2	A	301	307	anti-parallel
Strand 3	A	37	43	anti-parallel
Strand 4	A	89	94	anti-parallel
Strand 5	A	71	75	anti-parallel
Strand 6	A	356	359	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	81	82	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	159	first strand
Strand 2	A	131	133	parallel
Strand 3	A	285	288	parallel
Strand 4	A	264	268	parallel
Strand 5	A	231	234	parallel
Strand 6	A	205	207	parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	332	336	first strand
Strand 2	A	322	327	anti-parallel
Strand 3	A	351	353	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	711	first strand
Strand 2	B	701	707	anti-parallel
Strand 3	B	437	443	anti-parallel
Strand 4	B	489	494	anti-parallel
Strand 5	B	472	475	anti-parallel
Strand 6	B	756	759	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	455	first strand
Strand 2	B	481	482	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	558	559	first strand
Strand 2	B	531	533	parallel
Strand 3	B	685	688	parallel
Strand 4	B	664	668	parallel
Strand 5	B	631	634	parallel
Strand 6	B	605	607	parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	732	736	first strand
Strand 2	B	722	727	anti-parallel
Strand 3	B	751	753	anti-parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1310	1311	first strand
Strand 2	C	1301	1307	anti-parallel
Strand 3	C	1037	1043	anti-parallel
Strand 4	C	1089	1094	anti-parallel
Strand 5	C	1071	1075	anti-parallel
Strand 6	C	1356	1359	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1054	1055	first strand
Strand 2	C	1081	1082	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1158	1159	first strand
Strand 2	C	1131	1133	parallel
Strand 3	C	1285	1288	parallel
Strand 4	C	1264	1268	parallel
Strand 5	C	1231	1234	parallel
Strand 6	C	1205	1207	parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1332	1336	first strand
Strand 2	C	1322	1327	anti-parallel
Strand 3	C	1351	1353	anti-parallel

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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1710	1711	first strand
Strand 2	D	1701	1707	anti-parallel
Strand 3	D	1437	1443	anti-parallel
Strand 4	D	1489	1494	anti-parallel
Strand 5	D	1472	1475	anti-parallel
Strand 6	D	1756	1759	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1454	1455	first strand
Strand 2	D	1481	1482	anti-parallel

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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1558	1559	first strand
Strand 2	D	1531	1533	parallel
Strand 3	D	1685	1688	parallel
Strand 4	D	1664	1668	parallel
Strand 5	D	1631	1634	parallel
Strand 6	D	1605	1607	parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1732	1736	first strand
Strand 2	D	1722	1727	anti-parallel
Strand 3	D	1751	1753	anti-parallel

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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2310	2311	first strand
Strand 2	E	2301	2307	anti-parallel
Strand 3	E	2037	2043	anti-parallel
Strand 4	E	2089	2094	anti-parallel
Strand 5	E	2071	2075	anti-parallel
Strand 6	E	2356	2360	anti-parallel
Strand 7	E	2363	2364	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2054	2055	first strand
Strand 2	E	2081	2082	anti-parallel

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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2158	2159	first strand
Strand 2	E	2131	2133	parallel
Strand 3	E	2285	2288	parallel
Strand 4	E	2264	2268	parallel
Strand 5	E	2231	2234	parallel
Strand 6	E	2205	2207	parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2332	2336	first strand
Strand 2	E	2322	2327	anti-parallel
Strand 3	E	2351	2353	anti-parallel

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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2710	2711	first strand
Strand 2	F	2701	2707	anti-parallel
Strand 3	F	2437	2443	anti-parallel
Strand 4	F	2489	2494	anti-parallel
Strand 5	F	2471	2475	anti-parallel
Strand 6	F	2756	2759	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2454	2455	first strand
Strand 2	F	2481	2482	anti-parallel

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There are 6 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2558	2559	first strand
Strand 2	F	2531	2533	parallel
Strand 3	F	2685	2688	parallel
Strand 4	F	2664	2668	parallel
Strand 5	F	2631	2634	parallel
Strand 6	F	2605	2607	parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2732	2736	first strand
Strand 2	F	2722	2727	anti-parallel
Strand 3	F	2751	2753	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2I14

Analysis of interatomic Contacts of Structural Units in PDB entry:
2I14