Analysis of interatomic Contacts of Structural Units in PDB entry:
2I35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2I35 entry

There is 1 chain in PDB entry 2I35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLU 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2I35. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
27 32Right-handed 310
Helix 2
2
A
33 65Right-handed alpha
Helix 3
3
A
70 89Right-handed alpha
Helix 4
4
A
89 99Right-handed alpha
Helix 5
5
A
105 140Right-handed alpha
Helix 6
6
A
151 169Right-handed alpha
Helix 7
7
A
169 174Right-handed alpha
Helix 8
8
A
199 212Right-handed alpha
Helix 9
9
A
212 233Right-handed alpha
Helix 10
10
A
240 278Right-handed alpha
Helix 11
11
A
285 296Right-handed alpha
Helix 12
12
A
297 299Right-handed 310
Helix 13
13
A
300 310Right-handed alpha
Helix 14
14
A
310 323Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2I35.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
178 181first strand
Strand 2
A
186 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il