Analysis of interatomic Contacts of Structural Units in PDB entry:
2I62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2I62 entry

There are 4 chains in PDB entry 2I62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 6GLY 262
B
 GLY 5GLU 265
C
 GLY 5GLY 262
D
 PHE 6SER 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 2I62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 16Right-handed alpha
Helix 2
2
A
17 27Right-handed alpha
Helix 3
3
A
32 52Right-handed alpha
Helix 4
4
A
69 73Right-handed 310
Helix 5
5
A
74 77Right-handed 310
Helix 6
6
A
88 100Right-handed alpha
Helix 7
7
A
108 119Right-handed alpha
Helix 8
8
A
124 135Right-handed alpha
Helix 9
9
A
166 171Right-handed alpha
Helix 10
10
A
173 186Right-handed alpha
Helix 11
11
A
218 229Right-handed alpha
Helix 12
12
B
8 16Right-handed alpha
Helix 13
13
B
17 27Right-handed alpha
Helix 14
14
B
32 52Right-handed alpha
Helix 15
15
B
69 73Right-handed 310
Helix 16
16
B
74 77Right-handed 310
Helix 17
17
B
88 100Right-handed alpha
Helix 18
18
B
108 119Right-handed alpha
Helix 19
19
B
124 135Right-handed alpha
Helix 20
20
B
166 171Right-handed alpha
Helix 21
21
B
173 186Right-handed alpha
Helix 22
22
B
218 229Right-handed alpha
Helix 23
23
C
8 16Right-handed alpha
Helix 24
24
C
17 27Right-handed alpha
Helix 25
25
C
32 52Right-handed alpha
Helix 26
26
C
69 73Right-handed 310
Helix 27
27
C
74 77Right-handed 310
Helix 28
28
C
88 100Right-handed alpha
Helix 29
29
C
108 120Right-handed alpha
Helix 30
30
C
124 135Right-handed alpha
Helix 31
31
C
166 171Right-handed alpha
Helix 32
32
C
173 186Right-handed alpha
Helix 33
33
C
218 229Right-handed alpha
Helix 34
34
D
8 16Right-handed alpha
Helix 35
35
D
17 27Right-handed alpha
Helix 36
36
D
32 52Right-handed alpha
Helix 37
37
D
69 73Right-handed 310
Helix 38
38
D
74 77Right-handed 310
Helix 39
39
D
88 100Right-handed alpha
Helix 40
40
D
108 119Right-handed alpha
Helix 41
41
D
124 135Right-handed alpha
Helix 42
42
D
166 171Right-handed alpha
Helix 43
43
D
173 186Right-handed alpha
Helix 44
44
D
218 229Right-handed alpha
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There are 8 sheets in PDB entry 2I62. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 141first strand
Strand 2
A
79 86parallel
Strand 3
A
57 63parallel
Strand 4
A
158 164parallel
Strand 5
A
188 199parallel
Strand 6
A
253 259anti-parallel
Strand 7
A
232 239anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
A
210 213anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 141first strand
Strand 2
B
79 86parallel
Strand 3
B
57 63parallel
Strand 4
B
158 164parallel
Strand 5
B
188 199parallel
Strand 6
B
253 259anti-parallel
Strand 7
B
232 239anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 207first strand
Strand 2
B
210 213anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 141first strand
Strand 2
C
79 86parallel
Strand 3
C
57 63parallel
Strand 4
C
158 164parallel
Strand 5
C
188 199parallel
Strand 6
C
253 259anti-parallel
Strand 7
C
232 239anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
204 207first strand
Strand 2
C
210 213anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
136 141first strand
Strand 2
D
79 86parallel
Strand 3
D
57 63parallel
Strand 4
D
158 164parallel
Strand 5
D
188 199parallel
Strand 6
D
253 259anti-parallel
Strand 7
D
232 239anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
204 207first strand
Strand 2
D
210 213anti-parallel
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