Analysis of interatomic Contacts of Structural Units in PDB entry:
2I8H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2I8H entry

There is 1 chain in PDB entry 2I8H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue

 GLN 38ILE 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2I8H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
41 46Right-handed 310
Helix 2
2
49 60Right-handed alpha
Helix 3
3
76 89Right-handed alpha
Helix 4
4
129 139Right-handed alpha
Helix 5
5
164 170Right-handed alpha
Helix 6
6
171 175Right-handed 310
Helix 7
7
179 183Right-handed 310
Helix 8
8
186 195Right-handed alpha
Helix 9
9
195 205Right-handed alpha
Helix 10
10
206 214Right-handed alpha
Helix 11
11
215 217Right-handed 310
Helix 12
12
218 226Right-handed alpha
Helix 13
13
230 241Right-handed alpha
Helix 14
14
243 247Right-handed 310
Helix 15
15
250 262Right-handed alpha
Helix 16
16
275 285Right-handed alpha
Helix 17
17
331 337Right-handed alpha
Helix 18
18
345 355Right-handed alpha
Helix 19
19
370 376Right-handed 310
Helix 20
20
409 414Right-handed alpha
Helix 21
21
419 436Right-handed alpha
Helix 22
22
453 455Right-handed 310
Helix 23
23
468 479Right-handed alpha
Helix 24
24
488 492Right-handed 310
Helix 25
25
497 512Right-handed alpha
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There are 6 sheets in PDB entry 2I8H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

289 290first strand
Strand 2

92 96parallel
Strand 3

69 73parallel
Strand 4

325 328parallel
Strand 5

484 486parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

108 111first strand
Strand 2

116 119anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

125 126first strand
Strand 2

267 270anti-parallel
Strand 3

143 145anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

160 163first strand
Strand 2

154 157anti-parallel
Strand 3

381 384parallel
Strand 4

390 392anti-parallel
Strand 5

401 408anti-parallel
Strand 6

360 367anti-parallel
Strand 7

444 451anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

317 323first strand
Strand 2

304 311anti-parallel
Strand 3

295 301anti-parallel
Strand 4

339 341parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

357 358first strand
Strand 2

462 463anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il