Analysis of interatomic Contacts of Structural Units in PDB entry:
2ID0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2ID0 entry

There are 4 chains in PDB entry 2ID0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 5	ALA 644
B	ASN 5	ALA 644
C	ASN 5	ALA 644
D	ASN 5	ALA 644

There are 77 helices in PDB entry 2ID0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	5	18	Right-handed alpha
Helix 2	2	A	47	52	Right-handed alpha
Helix 3	3	A	135	139	Right-handed 310
Helix 4	4	A	158	168	Right-handed alpha
Helix 5	5	A	231	234	Right-handed 310
Helix 6	6	A	239	249	Right-handed alpha
Helix 7	7	A	263	268	Right-handed alpha
Helix 8	8	A	313	320	Right-handed alpha
Helix 9	9	A	330	355	Right-handed alpha
Helix 10	10	A	383	408	Right-handed alpha
Helix 11	11	A	423	435	Right-handed alpha
Helix 12	12	A	439	444	Right-handed alpha
Helix 13	13	A	445	458	Right-handed alpha
Helix 14	14	A	462	469	Right-handed alpha
Helix 15	15	A	501	515	Right-handed alpha
Helix 16	16	A	526	555	Right-handed alpha
Helix 17	17	A	556	558	Right-handed 310
Helix 18	18	A	592	594	Right-handed 310
Helix 19	19	A	597	599	Right-handed 310
Helix 20	20	B	5	14	Right-handed alpha
Helix 21	21	B	47	52	Right-handed alpha
Helix 22	22	B	135	139	Right-handed 310
Helix 23	23	B	158	169	Right-handed alpha
Helix 24	24	B	231	234	Right-handed 310
Helix 25	25	B	239	249	Right-handed alpha
Helix 26	26	B	263	268	Right-handed alpha
Helix 27	27	B	313	322	Right-handed alpha
Helix 28	28	B	330	355	Right-handed alpha
Helix 29	29	B	383	407	Right-handed alpha
Helix 30	30	B	423	433	Right-handed alpha
Helix 31	31	B	441	444	Right-handed 310
Helix 32	32	B	445	459	Right-handed alpha
Helix 33	33	B	462	468	Right-handed alpha
Helix 34	34	B	469	472	Right-handed 310
Helix 35	35	B	501	516	Right-handed alpha
Helix 36	36	B	524	555	Right-handed alpha
Helix 37	37	B	556	558	Right-handed 310
Helix 38	38	B	592	594	Right-handed 310
Helix 39	39	B	597	599	Right-handed 310
Helix 40	40	C	5	18	Right-handed alpha
Helix 41	41	C	49	53	Right-handed 310
Helix 42	42	C	135	139	Right-handed 310
Helix 43	43	C	158	168	Right-handed alpha
Helix 44	44	C	231	234	Right-handed 310
Helix 45	45	C	239	249	Right-handed alpha
Helix 46	46	C	263	269	Right-handed alpha
Helix 47	47	C	313	322	Right-handed alpha
Helix 48	48	C	330	355	Right-handed alpha
Helix 49	49	C	383	407	Right-handed alpha
Helix 50	50	C	420	434	Right-handed alpha
Helix 51	51	C	439	444	Right-handed alpha
Helix 52	52	C	445	458	Right-handed alpha
Helix 53	53	C	462	468	Right-handed alpha
Helix 54	54	C	469	472	Right-handed 310
Helix 55	55	C	501	515	Right-handed alpha
Helix 56	56	C	524	555	Right-handed alpha
Helix 57	57	C	556	558	Right-handed 310
Helix 58	58	C	592	594	Right-handed 310
Helix 59	59	C	597	599	Right-handed 310
Helix 60	60	D	5	19	Right-handed alpha
Helix 61	61	D	135	140	Right-handed alpha
Helix 62	62	D	158	168	Right-handed alpha
Helix 63	63	D	239	249	Right-handed alpha
Helix 64	64	D	263	269	Right-handed alpha
Helix 65	65	D	313	322	Right-handed alpha
Helix 66	66	D	330	355	Right-handed alpha
Helix 67	67	D	383	408	Right-handed alpha
Helix 68	68	D	420	433	Right-handed alpha
Helix 69	69	D	441	444	Right-handed 310
Helix 70	70	D	445	457	Right-handed alpha
Helix 71	71	D	462	469	Right-handed alpha
Helix 72	72	D	470	472	Right-handed 310
Helix 73	73	D	501	516	Right-handed alpha
Helix 74	74	D	526	555	Right-handed alpha
Helix 75	75	D	556	558	Right-handed 310
Helix 76	76	D	592	594	Right-handed 310
Helix 77	77	D	597	599	Right-handed 310

There are 35 sheets in PDB entry 2ID0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	27	first strand
Strand 2	A	34	37	anti-parallel
Strand 3	A	43	46	anti-parallel
Strand 4	A	72	80	parallel
Strand 5	A	59	65	anti-parallel
Strand 6	A	21	27	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	96	101	anti-parallel
Strand 3	A	85	93	anti-parallel
Strand 4	A	127	134	anti-parallel
Strand 5	A	144	152	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	201	first strand
Strand 2	A	310	312	parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	214	first strand
Strand 2	A	222	229	anti-parallel
Strand 3	A	278	288	anti-parallel
Strand 4	A	300	306	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	254	first strand
Strand 2	A	257	259	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	368	first strand
Strand 2	A	374	379	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	415	first strand
Strand 2	A	476	478	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	564	572	first strand
Strand 2	A	575	580	anti-parallel
Strand 3	A	586	590	anti-parallel
Strand 4	A	637	642	parallel
Strand 5	A	623	632	anti-parallel
Strand 6	A	564	572	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	601	604	first strand
Strand 2	A	609	612	anti-parallel
Strand 3	A	615	619	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	27	first strand
Strand 2	B	34	37	anti-parallel
Strand 3	B	43	46	anti-parallel
Strand 4	B	71	80	parallel
Strand 5	B	59	66	anti-parallel
Strand 6	B	21	27	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	93	first strand
Strand 2	B	96	101	anti-parallel
Strand 3	B	110	114	anti-parallel
Strand 4	B	144	152	parallel
Strand 5	B	127	134	anti-parallel
Strand 6	B	85	93	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	191	first strand
Strand 2	B	299	306	parallel
Strand 3	B	278	288	anti-parallel
Strand 4	B	221	229	anti-parallel
Strand 5	B	210	217	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	201	first strand
Strand 2	B	310	312	parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	254	first strand
Strand 2	B	257	259	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	368	first strand
Strand 2	B	374	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	415	first strand
Strand 2	B	476	478	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	563	572	first strand
Strand 2	B	575	580	anti-parallel
Strand 3	B	586	590	anti-parallel
Strand 4	B	637	642	parallel
Strand 5	B	623	632	anti-parallel
Strand 6	B	563	572	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	601	604	first strand
Strand 2	B	609	612	anti-parallel
Strand 3	B	615	619	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	27	first strand
Strand 2	C	34	39	anti-parallel
Strand 3	C	42	46	anti-parallel
Strand 4	C	72	80	parallel
Strand 5	C	59	65	anti-parallel
Strand 6	C	21	27	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	93	first strand
Strand 2	C	96	101	anti-parallel
Strand 3	C	110	114	anti-parallel
Strand 4	C	144	152	parallel
Strand 5	C	127	134	anti-parallel
Strand 6	C	85	93	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	190	191	first strand
Strand 2	C	299	305	parallel
Strand 3	C	279	288	anti-parallel
Strand 4	C	221	229	anti-parallel
Strand 5	C	210	217	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	201	first strand
Strand 2	C	309	312	parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	252	254	first strand
Strand 2	C	257	259	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	368	first strand
Strand 2	C	374	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	415	first strand
Strand 2	C	476	478	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	563	572	first strand
Strand 2	C	575	580	anti-parallel
Strand 3	C	586	590	anti-parallel
Strand 4	C	637	642	parallel
Strand 5	C	623	632	anti-parallel
Strand 6	C	563	572	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	604	first strand
Strand 2	C	609	612	anti-parallel
Strand 3	C	615	619	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	28	first strand
Strand 2	D	34	37	anti-parallel
Strand 3	D	43	46	anti-parallel
Strand 4	D	72	80	parallel
Strand 5	D	59	65	anti-parallel
Strand 6	D	21	28	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	92	first strand
Strand 2	D	97	101	anti-parallel
Strand 3	D	110	114	anti-parallel
Strand 4	D	144	152	parallel
Strand 5	D	127	134	anti-parallel
Strand 6	D	85	92	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	190	201	first strand
Strand 2	D	210	216	anti-parallel
Strand 3	D	222	229	anti-parallel
Strand 4	D	278	288	anti-parallel
Strand 5	D	294	312	anti-parallel
Strand 6	D	190	201	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	252	254	first strand
Strand 2	D	257	259	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	363	368	first strand
Strand 2	D	374	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	415	first strand
Strand 2	D	476	478	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	564	572	first strand
Strand 2	D	575	580	anti-parallel
Strand 3	D	586	590	anti-parallel
Strand 4	D	637	642	parallel
Strand 5	D	623	632	anti-parallel
Strand 6	D	564	572	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	601	604	first strand
Strand 2	D	609	612	anti-parallel
Strand 3	D	615	619	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2ID0

Analysis of interatomic Contacts of Structural Units in PDB entry:
2ID0