Analysis of interatomic Contacts of Structural Units in PDB entry:
2IGL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2IGL entry

There are 4 chains in PDB entry 2IGL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 22SER 137
B
 HIS 22SER 137
C
 HIS 22SER 137
D
 HIS 22SER 137
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 2IGL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
90 97Right-handed alpha
Helix 2
2
B
90 97Right-handed alpha
Helix 3
3
C
90 97Right-handed alpha
Helix 4
4
D
90 97Right-handed alpha
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There are 8 sheets in PDB entry 2IGL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
120 127parallel
Strand 4
A
130 134anti-parallel
Strand 5
B
130 134anti-parallel
Strand 6
B
120 126anti-parallel
Strand 7
B
29 35parallel
Strand 8
B
40 41anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
120 127parallel
Strand 4
A
130 134anti-parallel
Strand 5
B
130 134anti-parallel
Strand 6
B
120 126anti-parallel
Strand 7
B
29 35parallel
Strand 8
B
70 71anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 64first strand
Strand 2
A
46 52anti-parallel
Strand 3
A
83 89anti-parallel
Strand 4
A
107 113anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 64first strand
Strand 2
B
46 53anti-parallel
Strand 3
B
83 89anti-parallel
Strand 4
B
107 113anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 41first strand
Strand 2
C
29 35anti-parallel
Strand 3
C
120 127parallel
Strand 4
C
130 134anti-parallel
Strand 5
D
130 134anti-parallel
Strand 6
D
120 127anti-parallel
Strand 7
D
29 35parallel
Strand 8
D
40 41anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 71first strand
Strand 2
C
29 35anti-parallel
Strand 3
C
120 127parallel
Strand 4
C
130 134anti-parallel
Strand 5
D
130 134anti-parallel
Strand 6
D
120 127anti-parallel
Strand 7
D
29 35parallel
Strand 8
D
70 71anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 64first strand
Strand 2
C
46 53anti-parallel
Strand 3
C
83 89anti-parallel
Strand 4
C
107 113anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 64first strand
Strand 2
D
46 53anti-parallel
Strand 3
D
83 89anti-parallel
Strand 4
D
107 113anti-parallel
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