Analysis of interatomic Contacts of Structural Units in PDB entry:
2IIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2IIU entry

There are 3 chains in PDB entry 2IIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13VAL 226
B
 SER 13VAL 226
C
 LEU 7VAL 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2IIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 31Right-handed alpha
Helix 2
2
A
31 41Right-handed alpha
Helix 3
3
A
43 71Right-handed alpha
Helix 4
4
A
81 110Right-handed alpha
Helix 5
5
A
114 116Right-handed 310
Helix 6
6
A
117 147Right-handed alpha
Helix 7
7
A
152 187Right-handed alpha
Helix 8
8
A
188 190Right-handed 310
Helix 9
9
A
191 225Right-handed alpha
Helix 10
10
B
15 31Right-handed alpha
Helix 11
11
B
31 41Right-handed alpha
Helix 12
12
B
43 70Right-handed alpha
Helix 13
13
B
81 110Right-handed alpha
Helix 14
14
B
114 116Right-handed 310
Helix 15
15
B
117 146Right-handed alpha
Helix 16
16
B
152 187Right-handed alpha
Helix 17
17
B
188 190Right-handed 310
Helix 18
18
B
191 225Right-handed alpha
Helix 19
19
C
15 31Right-handed alpha
Helix 20
20
C
31 41Right-handed alpha
Helix 21
21
C
43 70Right-handed alpha
Helix 22
22
C
81 110Right-handed alpha
Helix 23
23
C
114 116Right-handed 310
Helix 24
24
C
117 146Right-handed alpha
Helix 25
25
C
147 148Right-handed 310
Helix 26
26
C
151 151Right-handed 310
Helix 27
27
C
152 187Right-handed alpha
Helix 28
28
C
188 190Right-handed 310
Helix 29
29
C
191 224Right-handed alpha
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There are no sheets in PDB entry 2IIU
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il