Analysis of interatomic Contacts of Structural Units in PDB entry:
2IJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2IJG entry

There is 1 chain in PDB entry 2IJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 MET 1HIS 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2IJG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
12 27Right-handed alpha
Helix 2
2
X
56 65Right-handed alpha
Helix 3
3
X
76 81Right-handed 310
Helix 4
4
X
92 113Right-handed alpha
Helix 5
5
X
123 135Right-handed alpha
Helix 6
6
X
147 164Right-handed alpha
Helix 7
7
X
179 183Right-handed 310
Helix 8
8
X
186 190Right-handed 310
Helix 9
9
X
193 205Right-handed alpha
Helix 10
10
X
232 236Right-handed 310
Helix 11
11
X
251 264Right-handed alpha
Helix 12
12
X
267 270Right-handed 310
Helix 13
13
X
271 276Right-handed alpha
Helix 14
14
X
288 294Right-handed alpha
Helix 15
15
X
298 313Right-handed alpha
Helix 16
16
X
316 340Right-handed alpha
Helix 17
17
X
341 344Right-handed 310
Helix 18
18
X
359 368Right-handed alpha
Helix 19
19
X
373 387Right-handed alpha
Helix 20
20
X
390 404Right-handed alpha
Helix 21
21
X
408 420Right-handed alpha
Helix 22
22
X
424 436Right-handed alpha
Helix 23
23
X
441 445Right-handed 310
Helix 24
24
X
449 458Right-handed alpha
Helix 25
25
X
461 468Right-handed alpha
Helix 26
26
X
469 472Right-handed 310
Helix 27
27
X
475 481Right-handed alpha
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There are 2 sheets in PDB entry 2IJG. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
5 6first strand
Strand 2
X
245 246parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
118 121first strand
Strand 2
X
68 75parallel
Strand 3
X
42 46parallel
Strand 4
X
137 143parallel
Strand 5
X
168 172parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il