Analysis of interatomic Contacts of Structural Units in PDB entry:
2IJZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2IJZ entry

There are 12 chains in PDB entry 2IJZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 9	SER 426
B	LEU 9	SER 426
C	LEU 9	SER 426
D	LEU 9	SER 426
E	LEU 9	SER 426
F	LEU 9	SER 426
G	LEU 9	SER 426
H	LEU 9	SER 426
I	LEU 9	SER 426
J	LEU 9	SER 426
K	LEU 9	SER 426
L	LEU 9	SER 426

There are115 helices in PDB entry 2IJZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	24	Right-handed alpha
Helix 2	2	A	26	38	Right-handed alpha
Helix 3	3	A	246	251	Right-handed alpha
Helix 4	4	A	271	276	Right-handed alpha
Helix 5	5	A	316	320	Right-handed 310
Helix 6	6	A	345	350	Right-handed alpha
Helix 7	7	A	353	359	Right-handed alpha
Helix 8	8	A	382	387	Right-handed 310
Helix 9	9	A	410	417	Right-handed alpha
Helix 10	10	A	418	423	Right-handed alpha
Helix 11	11	B	16	24	Right-handed alpha
Helix 12	12	B	26	38	Right-handed alpha
Helix 13	13	B	271	276	Right-handed alpha
Helix 14	14	B	316	320	Right-handed 310
Helix 15	15	B	345	350	Right-handed alpha
Helix 16	16	B	353	359	Right-handed alpha
Helix 17	17	B	382	387	Right-handed 310
Helix 18	18	B	410	417	Right-handed alpha
Helix 19	19	B	418	423	Right-handed alpha
Helix 20	20	C	16	24	Right-handed alpha
Helix 21	21	C	26	38	Right-handed alpha
Helix 22	22	C	271	276	Right-handed alpha
Helix 23	23	C	316	320	Right-handed 310
Helix 24	24	C	345	350	Right-handed alpha
Helix 25	25	C	353	359	Right-handed alpha
Helix 26	26	C	382	386	Right-handed 310
Helix 27	27	C	410	417	Right-handed alpha
Helix 28	28	C	418	423	Right-handed alpha
Helix 29	29	D	16	24	Right-handed alpha
Helix 30	30	D	26	38	Right-handed alpha
Helix 31	31	D	271	276	Right-handed alpha
Helix 32	32	D	316	320	Right-handed 310
Helix 33	33	D	345	350	Right-handed alpha
Helix 34	34	D	353	359	Right-handed alpha
Helix 35	35	D	382	386	Right-handed 310
Helix 36	36	D	410	417	Right-handed alpha
Helix 37	37	D	418	423	Right-handed alpha
Helix 38	38	E	16	24	Right-handed alpha
Helix 39	39	E	26	38	Right-handed alpha
Helix 40	40	E	241	246	Right-handed alpha
Helix 41	41	E	271	276	Right-handed alpha
Helix 42	42	E	316	320	Right-handed 310
Helix 43	43	E	345	350	Right-handed alpha
Helix 44	44	E	353	359	Right-handed alpha
Helix 45	45	E	382	387	Right-handed 310
Helix 46	46	E	410	423	Right-handed alpha
Helix 47	47	F	16	24	Right-handed alpha
Helix 48	48	F	26	38	Right-handed alpha
Helix 49	49	F	271	276	Right-handed alpha
Helix 50	50	F	316	320	Right-handed 310
Helix 51	51	F	345	350	Right-handed alpha
Helix 52	52	F	353	359	Right-handed alpha
Helix 53	53	F	382	386	Right-handed 310
Helix 54	54	F	410	417	Right-handed alpha
Helix 55	55	F	418	423	Right-handed alpha
Helix 56	56	G	16	24	Right-handed alpha
Helix 57	57	G	26	38	Right-handed alpha
Helix 58	58	G	271	276	Right-handed alpha
Helix 59	59	G	316	320	Right-handed 310
Helix 60	60	G	345	350	Right-handed alpha
Helix 61	61	G	353	359	Right-handed alpha
Helix 62	62	G	382	386	Right-handed 310
Helix 63	63	G	410	417	Right-handed alpha
Helix 64	64	G	418	423	Right-handed alpha
Helix 65	65	H	16	24	Right-handed alpha
Helix 66	66	H	26	38	Right-handed alpha
Helix 67	67	H	271	276	Right-handed alpha
Helix 68	68	H	316	320	Right-handed 310
Helix 69	69	H	345	350	Right-handed alpha
Helix 70	70	H	353	359	Right-handed alpha
Helix 71	71	H	382	386	Right-handed 310
Helix 72	72	H	410	417	Right-handed alpha
Helix 73	73	H	418	423	Right-handed alpha
Helix 74	74	I	16	24	Right-handed alpha
Helix 75	75	I	26	38	Right-handed alpha
Helix 76	76	I	241	246	Right-handed alpha
Helix 77	77	I	246	251	Right-handed alpha
Helix 78	78	I	271	276	Right-handed alpha
Helix 79	79	I	316	320	Right-handed 310
Helix 80	80	I	345	350	Right-handed alpha
Helix 81	81	I	353	359	Right-handed alpha
Helix 82	82	I	382	387	Right-handed 310
Helix 83	83	I	410	417	Right-handed alpha
Helix 84	84	I	418	423	Right-handed alpha
Helix 85	85	J	16	24	Right-handed alpha
Helix 86	86	J	26	38	Right-handed alpha
Helix 87	87	J	246	251	Right-handed alpha
Helix 88	88	J	271	276	Right-handed alpha
Helix 89	89	J	316	320	Right-handed 310
Helix 90	90	J	345	350	Right-handed alpha
Helix 91	91	J	353	359	Right-handed alpha
Helix 92	92	J	382	387	Right-handed 310
Helix 93	93	J	410	423	Right-handed alpha
Helix 94	94	K	16	24	Right-handed alpha
Helix 95	95	K	26	38	Right-handed alpha
Helix 96	96	K	241	246	Right-handed alpha
Helix 97	97	K	246	251	Right-handed alpha
Helix 98	98	K	271	276	Right-handed alpha
Helix 99	99	K	316	320	Right-handed 310
Helix 100	100	K	345	350	Right-handed alpha
Helix 101	101	K	353	359	Right-handed alpha
Helix 102	102	K	382	387	Right-handed 310
Helix 103	103	K	410	417	Right-handed alpha
Helix 104	104	K	418	423	Right-handed alpha
Helix 105	105	L	16	24	Right-handed alpha
Helix 106	106	L	26	38	Right-handed alpha
Helix 107	107	L	241	246	Right-handed alpha
Helix 108	108	L	246	251	Right-handed alpha
Helix 109	109	L	271	276	Right-handed alpha
Helix 110	110	L	316	320	Right-handed 310
Helix 111	111	L	345	350	Right-handed alpha
Helix 112	112	L	353	359	Right-handed alpha
Helix 113	113	L	382	387	Right-handed 310
Helix 114	114	L	410	417	Right-handed alpha
Helix 115	115	L	418	423	Right-handed alpha

There are 36 sheets in PDB entry 2IJZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	62	65	anti-parallel
Strand 3	A	259	262	anti-parallel
Strand 4	A	77	80	parallel
Strand 5	A	303	306	parallel
Strand 6	A	390	393	parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	137	first strand
Strand 2	A	122	129	anti-parallel
Strand 3	A	216	218	anti-parallel
Strand 4	A	87	98	anti-parallel
Strand 5	A	101	109	anti-parallel
Strand 6	A	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	62	65	anti-parallel
Strand 3	B	259	262	anti-parallel
Strand 4	B	77	80	parallel
Strand 5	B	303	306	parallel
Strand 6	B	390	393	parallel

Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	98	first strand
Strand 2	B	101	109	anti-parallel
Strand 3	B	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	137	first strand
Strand 2	B	122	129	anti-parallel
Strand 3	B	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	259	263	anti-parallel
Strand 4	C	77	80	parallel
Strand 5	C	303	306	parallel
Strand 6	C	390	393	parallel

Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	98	first strand
Strand 2	C	101	109	anti-parallel
Strand 3	C	176	179	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	122	124	first strand
Strand 2	C	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	128	first strand
Strand 2	C	134	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	61	65	anti-parallel
Strand 3	D	259	264	anti-parallel
Strand 4	D	77	82	parallel
Strand 5	D	303	306	parallel
Strand 6	D	390	393	parallel

Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	122	124	first strand
Strand 2	D	215	218	anti-parallel
Strand 3	D	87	98	anti-parallel
Strand 4	D	101	109	anti-parallel
Strand 5	D	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	128	first strand
Strand 2	D	134	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	61	65	anti-parallel
Strand 3	E	259	263	anti-parallel
Strand 4	E	77	80	parallel
Strand 5	E	303	306	parallel
Strand 6	E	390	393	parallel

Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	98	first strand
Strand 2	E	101	109	anti-parallel
Strand 3	E	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	122	124	first strand
Strand 2	E	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	128	first strand
Strand 2	E	134	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	54	first strand
Strand 2	F	61	65	anti-parallel
Strand 3	F	259	263	anti-parallel
Strand 4	F	77	80	parallel
Strand 5	F	303	306	parallel
Strand 6	F	390	393	parallel

Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	98	first strand
Strand 2	F	101	109	anti-parallel
Strand 3	F	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	122	124	first strand
Strand 2	F	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	128	first strand
Strand 2	F	134	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	61	65	anti-parallel
Strand 3	G	259	263	anti-parallel
Strand 4	G	77	80	parallel
Strand 5	G	303	306	parallel
Strand 6	G	390	393	parallel

Back to list of sheets
Back to top of page

There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	87	98	first strand
Strand 2	G	101	109	anti-parallel
Strand 3	G	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	122	124	first strand
Strand 2	G	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	128	first strand
Strand 2	G	134	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	54	first strand
Strand 2	H	62	65	anti-parallel
Strand 3	H	259	262	anti-parallel
Strand 4	H	77	80	parallel
Strand 5	H	303	306	parallel
Strand 6	H	390	393	parallel

Back to list of sheets
Back to top of page

There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	133	137	first strand
Strand 2	H	122	129	anti-parallel
Strand 3	H	216	218	anti-parallel
Strand 4	H	87	98	anti-parallel
Strand 5	H	101	109	anti-parallel
Strand 6	H	176	179	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	61	65	anti-parallel
Strand 3	I	259	264	anti-parallel
Strand 4	I	77	82	parallel
Strand 5	I	303	306	parallel
Strand 6	I	390	393	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	87	98	first strand
Strand 2	I	101	109	anti-parallel
Strand 3	I	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	122	124	first strand
Strand 2	I	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	126	129	first strand
Strand 2	I	133	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	54	first strand
Strand 2	J	61	65	anti-parallel
Strand 3	J	259	264	anti-parallel
Strand 4	J	77	82	parallel
Strand 5	J	303	306	parallel
Strand 6	J	390	393	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	122	124	first strand
Strand 2	J	216	218	anti-parallel
Strand 3	J	87	98	anti-parallel
Strand 4	J	101	109	anti-parallel
Strand 5	J	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	53	54	first strand
Strand 2	K	61	65	anti-parallel
Strand 3	K	259	263	anti-parallel
Strand 4	K	77	80	parallel
Strand 5	K	303	306	parallel
Strand 6	K	390	393	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	101	109	first strand
Strand 2	K	87	98	anti-parallel
Strand 3	K	215	218	anti-parallel
Strand 4	K	122	128	anti-parallel
Strand 5	K	134	136	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	54	first strand
Strand 2	L	61	65	anti-parallel
Strand 3	L	259	263	anti-parallel
Strand 4	L	77	80	parallel
Strand 5	L	303	306	parallel
Strand 6	L	390	393	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	133	137	first strand
Strand 2	L	122	129	anti-parallel
Strand 3	L	216	218	anti-parallel
Strand 4	L	87	98	anti-parallel
Strand 5	L	101	109	anti-parallel
Strand 6	L	176	179	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2IJZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
2IJZ