Analysis of interatomic Contacts of Structural Units in PDB entry:
2INF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2INF entry

There are 4 chains in PDB entry 2INF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6MET 349
B
 THR 6MET 349
C
 THR 6MET 349
D
 THR 6MET 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 2INF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
35 53Right-handed alpha
Helix 3
3
A
53 69Right-handed alpha
Helix 4
4
A
82 87Right-handed 310
Helix 5
5
A
106 112Right-handed alpha
Helix 6
6
A
117 122Right-handed alpha
Helix 7
7
A
122 136Right-handed alpha
Helix 8
8
A
147 158Right-handed alpha
Helix 9
9
A
164 174Right-handed alpha
Helix 10
10
A
174 199Right-handed alpha
Helix 11
11
A
210 214Right-handed 310
Helix 12
12
A
215 223Right-handed alpha
Helix 13
13
A
223 235Right-handed alpha
Helix 14
14
A
236 238Right-handed 310
Helix 15
15
A
248 250Right-handed 310
Helix 16
16
A
251 257Right-handed alpha
Helix 17
17
A
270 277Right-handed alpha
Helix 18
18
A
288 294Right-handed 310
Helix 19
19
A
295 311Right-handed alpha
Helix 20
20
A
329 349Right-handed alpha
Helix 21
21
B
9 16Right-handed alpha
Helix 22
22
B
35 51Right-handed alpha
Helix 23
23
B
53 69Right-handed alpha
Helix 24
24
B
83 87Right-handed 310
Helix 25
25
B
106 112Right-handed alpha
Helix 26
26
B
117 122Right-handed alpha
Helix 27
27
B
122 136Right-handed alpha
Helix 28
28
B
147 158Right-handed alpha
Helix 29
29
B
164 174Right-handed alpha
Helix 30
30
B
174 200Right-handed alpha
Helix 31
31
B
210 214Right-handed 310
Helix 32
32
B
215 223Right-handed alpha
Helix 33
33
B
223 236Right-handed alpha
Helix 34
34
B
248 250Right-handed 310
Helix 35
35
B
251 257Right-handed alpha
Helix 36
36
B
270 277Right-handed alpha
Helix 37
37
B
288 294Right-handed 310
Helix 38
38
B
295 311Right-handed alpha
Helix 39
39
B
329 349Right-handed alpha
Helix 40
40
C
9 16Right-handed alpha
Helix 41
41
C
35 46Right-handed alpha
Helix 42
42
C
46 51Right-handed alpha
Helix 43
43
C
53 69Right-handed alpha
Helix 44
44
C
82 87Right-handed 310
Helix 45
45
C
106 112Right-handed alpha
Helix 46
46
C
117 122Right-handed alpha
Helix 47
47
C
122 136Right-handed alpha
Helix 48
48
C
147 158Right-handed alpha
Helix 49
49
C
164 174Right-handed alpha
Helix 50
50
C
174 200Right-handed alpha
Helix 51
51
C
210 214Right-handed 310
Helix 52
52
C
215 223Right-handed alpha
Helix 53
53
C
223 236Right-handed alpha
Helix 54
54
C
248 250Right-handed 310
Helix 55
55
C
251 258Right-handed alpha
Helix 56
56
C
270 277Right-handed alpha
Helix 57
57
C
288 294Right-handed 310
Helix 58
58
C
295 311Right-handed alpha
Helix 59
59
C
329 349Right-handed alpha
Helix 60
60
D
9 16Right-handed alpha
Helix 61
61
D
35 46Right-handed alpha
Helix 62
62
D
46 51Right-handed alpha
Helix 63
63
D
53 69Right-handed alpha
Helix 64
64
D
83 87Right-handed 310
Helix 65
65
D
106 112Right-handed alpha
Helix 66
66
D
117 122Right-handed alpha
Helix 67
67
D
122 136Right-handed alpha
Helix 68
68
D
147 158Right-handed alpha
Helix 69
69
D
164 174Right-handed alpha
Helix 70
70
D
174 200Right-handed alpha
Helix 71
71
D
210 214Right-handed 310
Helix 72
72
D
215 223Right-handed alpha
Helix 73
73
D
223 235Right-handed alpha
Helix 74
74
D
236 238Right-handed 310
Helix 75
75
D
248 250Right-handed 310
Helix 76
76
D
251 258Right-handed alpha
Helix 77
77
D
270 277Right-handed alpha
Helix 78
78
D
288 294Right-handed 310
Helix 79
79
D
295 311Right-handed alpha
Helix 80
80
D
329 349Right-handed alpha
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There are 6 sheets in PDB entry 2INF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
141 146parallel
Strand 3
A
203 207parallel
Strand 4
A
241 244parallel
Strand 5
A
262 264parallel
Strand 6
A
282 284parallel
Strand 7
A
316 317parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
99 100anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 74first strand
Strand 2
B
141 146parallel
Strand 3
B
203 207parallel
Strand 4
B
241 244parallel
Strand 5
B
262 264parallel
Strand 6
B
282 284parallel
Strand 7
B
316 317parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 74first strand
Strand 2
C
141 146parallel
Strand 3
C
203 207parallel
Strand 4
C
241 244parallel
Strand 5
C
262 264parallel
Strand 6
C
282 284parallel
Strand 7
C
316 317parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 92first strand
Strand 2
C
98 100anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
73 74first strand
Strand 2
D
141 146parallel
Strand 3
D
203 207parallel
Strand 4
D
241 244parallel
Strand 5
D
262 264parallel
Strand 6
D
282 284parallel
Strand 7
D
316 317parallel
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