Analysis of interatomic Contacts of Structural Units in PDB entry:
2ISJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ISJ entry

There are 8 chains in PDB entry 2ISJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 9ARG 227
B
 LEU 9ARG 227
C
 LEU 9ARG 227
D
 LEU 9ARG 227
E
 LEU 9ARG 227
F
 LEU 9ARG 227
G
 LEU 9ARG 227
H
 LEU 9ARG 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 2ISJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 30Right-handed alpha
Helix 2
2
A
43 56Right-handed alpha
Helix 3
3
A
59 63Right-handed 310
Helix 4
4
A
73 93Right-handed alpha
Helix 5
5
A
96 104Right-handed alpha
Helix 6
6
A
139 159Right-handed alpha
Helix 7
7
A
170 179Right-handed alpha
Helix 8
8
A
202 207Right-handed alpha
Helix 9
9
A
214 217Right-handed 310
Helix 10
10
B
16 30Right-handed alpha
Helix 11
11
B
43 55Right-handed alpha
Helix 12
12
B
59 63Right-handed 310
Helix 13
13
B
73 93Right-handed alpha
Helix 14
14
B
96 105Right-handed alpha
Helix 15
15
B
139 159Right-handed alpha
Helix 16
16
B
170 179Right-handed alpha
Helix 17
17
B
202 207Right-handed alpha
Helix 18
18
B
214 217Right-handed 310
Helix 19
19
C
16 30Right-handed alpha
Helix 20
20
C
43 56Right-handed alpha
Helix 21
21
C
59 63Right-handed 310
Helix 22
22
C
73 94Right-handed alpha
Helix 23
23
C
96 106Right-handed alpha
Helix 24
24
C
139 159Right-handed alpha
Helix 25
25
C
170 179Right-handed alpha
Helix 26
26
C
202 207Right-handed alpha
Helix 27
27
C
214 218Right-handed alpha
Helix 28
28
D
16 30Right-handed alpha
Helix 29
29
D
43 56Right-handed alpha
Helix 30
30
D
59 63Right-handed 310
Helix 31
31
D
73 93Right-handed alpha
Helix 32
32
D
96 104Right-handed alpha
Helix 33
33
D
139 159Right-handed alpha
Helix 34
34
D
170 179Right-handed alpha
Helix 35
35
D
202 207Right-handed alpha
Helix 36
36
D
214 217Right-handed 310
Helix 37
37
E
16 30Right-handed alpha
Helix 38
38
E
43 56Right-handed alpha
Helix 39
39
E
59 63Right-handed 310
Helix 40
40
E
73 93Right-handed alpha
Helix 41
41
E
96 106Right-handed alpha
Helix 42
42
E
139 159Right-handed alpha
Helix 43
43
E
170 179Right-handed alpha
Helix 44
44
E
202 207Right-handed alpha
Helix 45
45
E
214 217Right-handed 310
Helix 46
46
F
16 30Right-handed alpha
Helix 47
47
F
43 56Right-handed alpha
Helix 48
48
F
59 63Right-handed 310
Helix 49
49
F
73 92Right-handed alpha
Helix 50
50
F
93 95Right-handed 310
Helix 51
51
F
96 105Right-handed alpha
Helix 52
52
F
139 159Right-handed alpha
Helix 53
53
F
170 179Right-handed alpha
Helix 54
54
F
202 207Right-handed alpha
Helix 55
55
F
214 218Right-handed alpha
Helix 56
56
G
16 30Right-handed alpha
Helix 57
57
G
43 56Right-handed alpha
Helix 58
58
G
59 63Right-handed 310
Helix 59
59
G
73 93Right-handed alpha
Helix 60
60
G
96 105Right-handed alpha
Helix 61
61
G
139 159Right-handed alpha
Helix 62
62
G
170 179Right-handed alpha
Helix 63
63
G
202 207Right-handed alpha
Helix 64
64
G
214 218Right-handed alpha
Helix 65
65
H
16 30Right-handed alpha
Helix 66
66
H
43 56Right-handed alpha
Helix 67
67
H
59 63Right-handed 310
Helix 68
68
H
73 93Right-handed alpha
Helix 69
69
H
96 104Right-handed alpha
Helix 70
70
H
139 159Right-handed alpha
Helix 71
71
H
170 179Right-handed alpha
Helix 72
72
H
202 207Right-handed alpha
Helix 73
73
H
214 217Right-handed 310
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There are 16 sheets in PDB entry 2ISJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
B
197 198anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 166first strand
Strand 2
A
184 194anti-parallel
Strand 3
A
116 123anti-parallel
Strand 4
A
66 71anti-parallel
Strand 5
B
219 221parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 198first strand
Strand 2
B
10 11anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
B
66 71parallel
Strand 3
B
116 123anti-parallel
Strand 4
B
184 194anti-parallel
Strand 5
B
161 166anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 11first strand
Strand 2
D
197 198anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 166first strand
Strand 2
C
184 194anti-parallel
Strand 3
C
116 123anti-parallel
Strand 4
C
66 71anti-parallel
Strand 5
D
219 221parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
197 198first strand
Strand 2
D
10 11anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
219 221first strand
Strand 2
D
66 71parallel
Strand 3
D
116 123anti-parallel
Strand 4
D
184 194anti-parallel
Strand 5
D
161 166anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 11first strand
Strand 2
F
197 198anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 166first strand
Strand 2
E
184 194anti-parallel
Strand 3
E
116 123anti-parallel
Strand 4
E
66 71anti-parallel
Strand 5
F
219 221parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
197 198first strand
Strand 2
F
10 11anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
219 221first strand
Strand 2
F
66 71parallel
Strand 3
F
116 123anti-parallel
Strand 4
F
184 194anti-parallel
Strand 5
F
161 166anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
10 11first strand
Strand 2
H
197 198anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
161 165first strand
Strand 2
G
184 194anti-parallel
Strand 3
G
116 123anti-parallel
Strand 4
G
66 71anti-parallel
Strand 5
H
219 221parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
197 198first strand
Strand 2
H
10 11anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
219 221first strand
Strand 2
H
66 71parallel
Strand 3
H
116 123anti-parallel
Strand 4
H
184 194anti-parallel
Strand 5
H
161 165anti-parallel
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