Analysis of interatomic Contacts of Structural Units in PDB entry:
2J0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J0H entry

There are 6 chains in PDB entry 2J0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 75ALA 288
B
 PRO 72ALA 288
C
 CYS 73ALA 288
D
 THR 75ALA 288
E
 ASN 71ALA 288
F
 PRO 77ALA 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2J0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 86Right-handed alpha
Helix 2
2
A
111 115Right-handed 310
Helix 3
3
A
133 140Right-handed alpha
Helix 4
4
A
151 161Right-handed alpha
Helix 5
5
A
189 193Right-handed 310
Helix 6
6
A
210 214Right-handed 310
Helix 7
7
A
231 237Right-handed alpha
Helix 8
8
B
79 86Right-handed alpha
Helix 9
9
B
111 115Right-handed 310
Helix 10
10
B
133 140Right-handed alpha
Helix 11
11
B
151 160Right-handed alpha
Helix 12
12
B
189 193Right-handed 310
Helix 13
13
B
210 214Right-handed 310
Helix 14
14
B
231 236Right-handed alpha
Helix 15
15
C
79 86Right-handed alpha
Helix 16
16
C
111 115Right-handed 310
Helix 17
17
C
133 140Right-handed alpha
Helix 18
18
C
151 160Right-handed alpha
Helix 19
19
C
189 193Right-handed 310
Helix 20
20
C
210 214Right-handed 310
Helix 21
21
C
231 236Right-handed alpha
Helix 22
22
D
79 86Right-handed alpha
Helix 23
23
D
111 115Right-handed 310
Helix 24
24
D
133 140Right-handed alpha
Helix 25
25
D
151 161Right-handed alpha
Helix 26
26
D
210 214Right-handed 310
Helix 27
27
D
231 237Right-handed alpha
Helix 28
28
E
71 76Right-handed alpha
Helix 29
29
E
79 86Right-handed alpha
Helix 30
30
E
111 115Right-handed 310
Helix 31
31
E
133 140Right-handed alpha
Helix 32
32
E
151 160Right-handed alpha
Helix 33
33
E
189 193Right-handed 310
Helix 34
34
E
210 214Right-handed 310
Helix 35
35
E
231 236Right-handed alpha
Helix 36
36
F
79 86Right-handed alpha
Helix 37
37
F
111 115Right-handed 310
Helix 38
38
F
133 140Right-handed alpha
Helix 39
39
F
151 160Right-handed alpha
Helix 40
40
F
189 193Right-handed 310
Helix 41
41
F
210 214Right-handed 310
Helix 42
42
F
231 236Right-handed alpha
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There are 20 sheets in PDB entry 2J0H. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, CA, CB, CC, CD, DA, DB, C, EA, EB, EC, FA, FB, FC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
280 285anti-parallel
Strand 5
A
167 171anti-parallel
Strand 6
A
177 181anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
148 149anti-parallel
Strand 5
A
141 142anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
196 198anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
276 277anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
117 123anti-parallel
Strand 4
B
280 287anti-parallel
Strand 5
B
164 171anti-parallel
Strand 6
B
177 187anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
117 123anti-parallel
Strand 4
B
148 149anti-parallel
Strand 5
B
141 142anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
276 277anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 97first strand
Strand 2
C
103 109anti-parallel
Strand 3
C
117 123anti-parallel
Strand 4
C
280 287anti-parallel
Strand 5
C
164 171anti-parallel
Strand 6
C
177 182anti-parallel
Strand 7
C
201 203anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 97first strand
Strand 2
C
103 109anti-parallel
Strand 3
C
117 123anti-parallel
Strand 4
C
148 149anti-parallel
Strand 5
C
141 142anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 187first strand
Strand 2
C
196 198anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 258first strand
Strand 2
C
276 277anti-parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 98first strand
Strand 2
D
102 109anti-parallel
Strand 3
D
117 123anti-parallel
Strand 4
D
141 142first strand
Strand 5
D
148 149anti-parallel
Strand 6
D
117 123anti-parallel
Strand 7
D
177 181first strand
Strand 8
D
164 171anti-parallel
Strand 9
D
280 287anti-parallel
Strand 10
D
117 123anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
185 187first strand
Strand 2
D
196 198anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
257 258first strand
Strand 2
D
276 277anti-parallel
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There are 11 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
92 97first strand
Strand 2
E
103 109anti-parallel
Strand 3
E
117 123anti-parallel
Strand 4
E
141 142first strand
Strand 5
E
148 149anti-parallel
Strand 6
E
117 123anti-parallel
Strand 7
E
201 203first strand
Strand 8
E
177 182anti-parallel
Strand 9
E
165 171anti-parallel
Strand 10
E
280 286anti-parallel
Strand 11
E
117 123anti-parallel
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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
185 187first strand
Strand 2
E
196 198anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
257 258first strand
Strand 2
E
276 277anti-parallel
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There are 11 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
92 97first strand
Strand 2
F
103 109anti-parallel
Strand 3
F
117 123anti-parallel
Strand 4
F
141 142first strand
Strand 5
F
148 149anti-parallel
Strand 6
F
117 123anti-parallel
Strand 7
F
201 203first strand
Strand 8
F
177 182anti-parallel
Strand 9
F
164 171anti-parallel
Strand 10
F
280 287anti-parallel
Strand 11
F
117 123anti-parallel
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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
185 187first strand
Strand 2
F
196 198anti-parallel
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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
257 258first strand
Strand 2
F
276 277anti-parallel
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