Analysis of interatomic Contacts of Structural Units in PDB entry:
2J0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J0S entry

There are 5 chains in PDB entry 2J0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 21ILE 411
C
 ASP 4ILE 146
D
 PRO 66PRO 154
E
 U 1 U 6
T
 HIS 169PRO 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2J0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 44Right-handed 310
Helix 2
2
A
46 57Right-handed alpha
Helix 3
3
A
62 74Right-handed alpha
Helix 4
4
A
87 99Right-handed alpha
Helix 5
5
A
115 130Right-handed alpha
Helix 6
6
A
145 156Right-handed alpha
Helix 7
7
A
163 173Right-handed alpha
Helix 8
8
A
188 193Right-handed alpha
Helix 9
9
A
197 206Right-handed alpha
Helix 10
10
A
222 227Right-handed alpha
Helix 11
11
A
228 232Right-handed 310
Helix 12
12
A
242 246Right-handed 310
Helix 13
13
A
262 276Right-handed alpha
Helix 14
14
A
286 300Right-handed alpha
Helix 15
15
A
312 325Right-handed alpha
Helix 16
16
A
335 338Right-handed 310
Helix 17
17
A
357 366Right-handed alpha
Helix 18
18
A
369 373Right-handed 310
Helix 19
19
A
384 396Right-handed alpha
Helix 20
20
C
39 43Right-handed 310
Helix 21
21
C
53 68Right-handed alpha
Helix 22
22
C
69 72Right-handed 310
Helix 23
23
C
106 112Right-handed alpha
Helix 24
24
C
115 142Right-handed alpha
Helix 25
25
D
85 95Right-handed alpha
Helix 26
26
D
123 135Right-handed alpha
Helix 27
27
T
171 175Right-handed 310
Helix 28
28
T
225 229Right-handed 310
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There are 4 sheets in PDB entry 2J0S. Click on sheet of interest to get list of strands forming it: AA, AB, CA, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
159 162parallel
Strand 3
A
109 112parallel
Strand 4
A
183 187parallel
Strand 5
A
213 218parallel
Strand 6
A
78 81parallel
Strand 7
A
237 239parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
330 333parallel
Strand 3
A
279 283parallel
Strand 4
A
346 351parallel
Strand 5
A
375 382parallel
Strand 6
A
251 258parallel
Strand 7
A
401 402parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 101first strand
Strand 2
C
85 92anti-parallel
Strand 3
C
5 15anti-parallel
Strand 4
C
18 26anti-parallel
Strand 5
C
31 37anti-parallel
Strand 6
C
46 52anti-parallel
Strand 7
D
150 151anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
99 106first strand
Strand 2
D
113 121anti-parallel
Strand 3
D
73 78anti-parallel
Strand 4
D
145 148anti-parallel
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