Analysis of interatomic Contacts of Structural Units in PDB entry:
2J0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J0X entry

There are 2 chains in PDB entry 2J0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3GLU 449
B
 SER 2GLU 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2J0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 15Right-handed 310
Helix 2
2
A
16 30Right-handed alpha
Helix 3
3
A
43 53Right-handed alpha
Helix 4
4
A
56 76Right-handed alpha
Helix 5
5
A
80 103Right-handed alpha
Helix 6
6
A
107 132Right-handed alpha
Helix 7
7
A
141 145Right-handed 310
Helix 8
8
A
158 177Right-handed alpha
Helix 9
9
A
199 212Right-handed alpha
Helix 10
10
A
245 250Right-handed alpha
Helix 11
11
A
251 258Right-handed alpha
Helix 12
12
A
260 263Right-handed 310
Helix 13
13
A
264 270Right-handed alpha
Helix 14
14
A
281 285Right-handed 310
Helix 15
15
A
316 319Right-handed 310
Helix 16
16
A
323 335Right-handed alpha
Helix 17
17
A
367 376Right-handed alpha
Helix 18
18
A
403 408Right-handed alpha
Helix 19
19
A
409 411Right-handed 310
Helix 20
20
A
433 448Right-handed alpha
Helix 21
21
B
11 15Right-handed 310
Helix 22
22
B
16 30Right-handed alpha
Helix 23
23
B
43 54Right-handed alpha
Helix 24
24
B
56 76Right-handed alpha
Helix 25
25
B
80 83Right-handed 310
Helix 26
26
B
84 103Right-handed alpha
Helix 27
27
B
107 132Right-handed alpha
Helix 28
28
B
141 145Right-handed 310
Helix 29
29
B
158 177Right-handed alpha
Helix 30
30
B
199 212Right-handed alpha
Helix 31
31
B
245 250Right-handed alpha
Helix 32
32
B
251 257Right-handed alpha
Helix 33
33
B
260 263Right-handed 310
Helix 34
34
B
264 270Right-handed alpha
Helix 35
35
B
316 319Right-handed 310
Helix 36
36
B
323 335Right-handed alpha
Helix 37
37
B
367 376Right-handed alpha
Helix 38
38
B
403 408Right-handed alpha
Helix 39
39
B
409 411Right-handed 310
Helix 40
40
B
433 448Right-handed alpha
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There are 5 sheets in PDB entry 2J0X. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
178 182parallel
Strand 3
A
33 38parallel
Strand 4
A
5 9parallel
Strand 5
A
216 221parallel
Strand 6
A
274 278parallel
Strand 7
A
287 290anti-parallel
Strand 8
A
242 244parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
185 188parallel
Strand 3
A
193 195anti-parallel
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There are 13 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 314first strand
Strand 2
A
379 393anti-parallel
Strand 3
A
426 432anti-parallel
Strand 4
A
417 420anti-parallel
Strand 5
B
417 420anti-parallel
Strand 6
B
426 432anti-parallel
Strand 7
B
379 393anti-parallel
Strand 8
B
299 314anti-parallel
Strand 9
B
348 354anti-parallel
Strand 10
B
338 344anti-parallel
Strand 11
A
338 344anti-parallel
Strand 12
A
348 354anti-parallel
Strand 13
A
299 314anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 140first strand
Strand 2
B
178 182parallel
Strand 3
B
33 38parallel
Strand 4
B
5 9parallel
Strand 5
B
216 221parallel
Strand 6
B
274 278parallel
Strand 7
B
287 290anti-parallel
Strand 8
B
242 244parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
185 188parallel
Strand 3
B
193 195anti-parallel
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