Analysis of interatomic Contacts of Structural Units in PDB entry:
2J1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J1L entry

There is 1 chain in PDB entry 2J1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 15SER 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2J1L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 39Right-handed alpha
Helix 2
2
A
100 110Right-handed alpha
Helix 3
3
A
110 119Right-handed alpha
Helix 4
4
A
130 135Right-handed 310
Helix 5
5
A
136 146Right-handed alpha
Helix 6
6
A
152 163Right-handed alpha
Helix 7
7
A
178 193Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2J1L.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 60first strand
Strand 2
A
63 71anti-parallel
Strand 3
A
17 24parallel
Strand 4
A
89 97parallel
Strand 5
A
124 129parallel
Strand 6
A
167 170parallel
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