Analysis of interatomic Contacts of Structural Units in PDB entry:
2J2N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J2N entry

There is 1 chain in PDB entry 2J2N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 52ILE 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2J2N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 65Right-handed alpha
Helix 2
2
A
88 105Right-handed alpha
Helix 3
3
A
115 127Right-handed alpha
Helix 4
4
A
128 133Right-handed alpha
Helix 5
5
A
152 159Right-handed 310
Helix 6
6
A
165 170Right-handed alpha
Helix 7
7
A
180 185Right-handed alpha
Helix 8
8
A
191 204Right-handed alpha
Helix 9
9
A
209 211Right-handed 310
Helix 10
10
A
212 217Right-handed alpha
Helix 11
11
A
218 221Right-handed 310
Helix 12
12
A
222 224Right-handed 310
Helix 13
13
A
225 230Right-handed alpha
Helix 14
14
A
231 237Right-handed alpha
Helix 15
15
A
250 258Right-handed alpha
Helix 16
16
A
272 277Right-handed alpha
Helix 17
17
A
293 302Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2J2N.

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
281 285parallel
Strand 3
A
307 312parallel
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