Analysis of interatomic Contacts of Structural Units in PDB entry:
2J2O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J2O entry

There is 1 chain in PDB entry 2J2O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3ARG 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2J2O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 45Right-handed 310
Helix 2
2
A
47 52Right-handed 310
Helix 3
3
A
76 91Right-handed alpha
Helix 4
4
A
102 115Right-handed alpha
Helix 5
5
A
116 119Right-handed 310
Helix 6
6
A
144 150Right-handed alpha
Helix 7
7
A
153 158Right-handed alpha
Helix 8
8
A
158 163Right-handed alpha
Helix 9
9
A
172 174Right-handed 310
Helix 10
10
A
175 181Right-handed alpha
Helix 11
11
A
182 185Right-handed 310
Helix 12
12
A
191 198Right-handed alpha
Helix 13
13
A
200 207Right-handed alpha
Helix 14
14
A
226 234Right-handed alpha
Helix 15
15
A
249 253Right-handed 310
Helix 16
16
A
254 270Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2J2O.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
56 60anti-parallel
Strand 4
A
30 34parallel
Strand 5
A
98 101parallel
Strand 6
A
122 125parallel
Strand 7
A
213 220parallel
Strand 8
A
239 246parallel
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