Analysis of interatomic Contacts of Structural Units in PDB entry:
2J37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J37 entry

There are 8 chains in PDB entry 2J37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
4
 GLN 69ILE 149
5
 GLY 4ARG 67
6
 THR 17LEU 97
A
 G 112 C 239
B
 ARG 14GLN 120
S
 LEU 50LYS 66
W
 ARG 8GLN 488
Z
 C 1 C 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 2J37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
4
79 89Right-handed alpha
Helix 2
2
4
102 114Right-handed alpha
Helix 3
3
4
142 148Right-handed alpha
Helix 4
4
5
7 14Right-handed alpha
Helix 5
5
5
15 39Right-handed alpha
Helix 6
6
5
45 66Right-handed alpha
Helix 7
7
6
24 31Right-handed 310
Helix 8
8
6
32 34Right-handed 310
Helix 9
9
6
35 51Right-handed alpha
Helix 10
10
6
60 68Right-handed alpha
Helix 11
11
B
19 23Right-handed 310
Helix 12
12
B
45 54Right-handed alpha
Helix 13
13
B
55 57Right-handed 310
Helix 14
14
B
101 112Right-handed alpha
Helix 15
15
B
115 120Right-handed alpha
Helix 16
16
S
50 65Right-handed alpha
Helix 17
17
W
24 40Right-handed alpha
Helix 18
18
W
49 61Right-handed alpha
Helix 19
19
W
70 88Right-handed alpha
Helix 20
20
W
113 128Right-handed alpha
Helix 21
21
W
143 156Right-handed alpha
Helix 22
22
W
167 182Right-handed alpha
Helix 23
23
W
198 213Right-handed alpha
Helix 24
24
W
228 241Right-handed alpha
Helix 25
25
W
257 267Right-handed alpha
Helix 26
26
W
286 293Right-handed alpha
Helix 27
27
W
303 308Right-handed alpha
Helix 28
28
W
325 330Right-handed 310
Helix 29
29
W
332 339Right-handed alpha
Helix 30
30
W
357 361Right-handed 310
Helix 31
31
W
367 380Right-handed alpha
Helix 32
32
W
383 389Right-handed alpha
Helix 33
33
W
391 399Right-handed alpha
Helix 34
34
W
400 410Right-handed alpha
Helix 35
35
W
413 429Right-handed alpha
Helix 36
36
W
438 443Right-handed alpha
Helix 37
37
W
449 459Right-handed alpha
Helix 38
38
W
465 476Right-handed alpha
Helix 39
39
W
481 488Right-handed alpha
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There are 4 sheets in PDB entry 2J37. Click on sheet of interest to get list of strands forming it: 4A, 6A, BA, WA,

There are 4 strands in 4A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
75 76first strand
Strand 2
4
91 95anti-parallel
Strand 3
4
131 136anti-parallel
Strand 4
4
117 123anti-parallel
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There are 4 strands in 6A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
18 22first strand
Strand 2
6
79 86anti-parallel
Strand 3
6
91 95anti-parallel
Strand 4
6
58 59parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
81 85anti-parallel
Strand 3
B
59 63anti-parallel
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There are 8 strands in WA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
W
159 161first strand
Strand 2
W
132 137parallel
Strand 3
W
186 191parallel
Strand 4
W
102 107parallel
Strand 5
W
216 222parallel
Strand 6
W
245 248parallel
Strand 7
W
270 274parallel
Strand 8
W
282 283anti-parallel
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