Analysis of interatomic Contacts of Structural Units in PDB entry:
2J3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J3E entry

There is 1 chain in PDB entry 2J3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2VAL 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2J3E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 14Right-handed alpha
Helix 2
2
A
15 32Right-handed alpha
Helix 3
3
A
48 58Right-handed alpha
Helix 4
4
A
101 112Right-handed alpha
Helix 5
5
A
133 146Right-handed alpha
Helix 6
6
A
147 153Right-handed alpha
Helix 7
7
A
170 190Right-handed alpha
Helix 8
8
A
191 194Right-handed 310
Helix 9
9
A
196 201Right-handed alpha
Helix 10
10
A
228 243Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2J3E.

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
75 81parallel
Strand 3
A
84 90anti-parallel
Strand 4
A
36 43parallel
Strand 5
A
119 125parallel
Strand 6
A
154 159parallel
Strand 7
A
204 207parallel
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