Analysis of interatomic Contacts of Structural Units in PDB entry:
2J4X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J4X entry

There is 1 chain in PDB entry 2J4X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 0SER 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2J4X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 14Right-handed alpha
Helix 2
2
A
58 65Right-handed alpha
Helix 3
3
A
99 101Right-handed 310
Helix 4
4
A
118 123Right-handed alpha
Helix 5
5
A
136 150Right-handed alpha
Helix 6
6
A
186 190Right-handed 310
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There are 3 sheets in PDB entry 2J4X. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 29first strand
Strand 2
A
70 83anti-parallel
Strand 3
A
86 92anti-parallel
Strand 4
A
52 56parallel
Strand 5
A
32 35anti-parallel
Strand 6
A
17 29anti-parallel
Strand 7
A
70 83anti-parallel
Strand 8
A
17 29anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 131first strand
Strand 2
A
103 113anti-parallel
Strand 3
A
198 205parallel
Strand 4
A
165 171anti-parallel
Strand 5
A
176 180anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
192 194anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il