Analysis of interatomic Contacts of Structural Units in PDB entry:
2J5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J5C entry

There are 2 chains in PDB entry 2J5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 84GLU 591
B
 ARG 87GLU 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 2J5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
84 102Right-handed alpha
Helix 2
2
A
104 118Right-handed alpha
Helix 3
3
A
120 123Right-handed 310
Helix 4
4
A
124 136Right-handed alpha
Helix 5
5
A
146 160Right-handed alpha
Helix 6
6
A
165 172Right-handed 310
Helix 7
7
A
181 186Right-handed 310
Helix 8
8
A
187 199Right-handed alpha
Helix 9
9
A
205 218Right-handed alpha
Helix 10
10
A
228 241Right-handed alpha
Helix 11
11
A
242 246Right-handed 310
Helix 12
12
A
248 260Right-handed alpha
Helix 13
13
A
266 299Right-handed alpha
Helix 14
14
A
299 304Right-handed alpha
Helix 15
15
A
310 322Right-handed alpha
Helix 16
16
A
324 326Right-handed 310
Helix 17
17
A
327 350Right-handed alpha
Helix 18
18
A
353 367Right-handed alpha
Helix 19
19
A
369 375Right-handed 310
Helix 20
20
A
376 402Right-handed alpha
Helix 21
21
A
405 430Right-handed alpha
Helix 22
22
A
434 446Right-handed alpha
Helix 23
23
A
448 459Right-handed alpha
Helix 24
24
A
464 472Right-handed alpha
Helix 25
25
A
475 493Right-handed alpha
Helix 26
26
A
505 510Right-handed alpha
Helix 27
27
A
518 543Right-handed alpha
Helix 28
28
A
546 564Right-handed alpha
Helix 29
29
A
565 568Right-handed 310
Helix 30
30
A
576 587Right-handed alpha
Helix 31
31
B
87 102Right-handed alpha
Helix 32
32
B
104 118Right-handed alpha
Helix 33
33
B
120 123Right-handed 310
Helix 34
34
B
124 136Right-handed alpha
Helix 35
35
B
146 160Right-handed alpha
Helix 36
36
B
165 172Right-handed 310
Helix 37
37
B
181 186Right-handed 310
Helix 38
38
B
187 198Right-handed alpha
Helix 39
39
B
199 201Right-handed 310
Helix 40
40
B
205 218Right-handed alpha
Helix 41
41
B
228 241Right-handed alpha
Helix 42
42
B
242 246Right-handed 310
Helix 43
43
B
248 260Right-handed alpha
Helix 44
44
B
266 299Right-handed alpha
Helix 45
45
B
299 304Right-handed alpha
Helix 46
46
B
310 322Right-handed alpha
Helix 47
47
B
327 350Right-handed alpha
Helix 48
48
B
353 367Right-handed alpha
Helix 49
49
B
369 375Right-handed 310
Helix 50
50
B
376 402Right-handed alpha
Helix 51
51
B
405 430Right-handed alpha
Helix 52
52
B
434 446Right-handed alpha
Helix 53
53
B
448 460Right-handed alpha
Helix 54
54
B
464 472Right-handed alpha
Helix 55
55
B
475 491Right-handed alpha
Helix 56
56
B
505 514Right-handed alpha
Helix 57
57
B
517 543Right-handed alpha
Helix 58
58
B
546 564Right-handed alpha
Helix 59
59
B
565 568Right-handed 310
Helix 60
60
B
576 587Right-handed alpha
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There are no sheets in PDB entry 2J5C
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il