Analysis of interatomic Contacts of Structural Units in PDB entry:
2J66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J66 entry

There is 1 chain in PDB entry 2J66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4GLN 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2J66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 15Right-handed alpha
Helix 2
2
A
24 37Right-handed alpha
Helix 3
3
A
49 51Right-handed 310
Helix 4
4
A
53 63Right-handed alpha
Helix 5
5
A
71 81Right-handed alpha
Helix 6
6
A
84 86Right-handed 310
Helix 7
7
A
96 107Right-handed alpha
Helix 8
8
A
115 130Right-handed alpha
Helix 9
9
A
165 176Right-handed alpha
Helix 10
10
A
194 217Right-handed alpha
Helix 11
11
A
241 258Right-handed alpha
Helix 12
12
A
271 276Right-handed alpha
Helix 13
13
A
376 380Right-handed 310
Helix 14
14
A
383 387Right-handed 310
Helix 15
15
A
408 414Right-handed alpha
Helix 16
16
A
415 417Right-handed 310
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There are 3 sheets in PDB entry 2J66. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
366 369anti-parallel
Strand 3
A
279 291anti-parallel
Strand 4
A
19 23anti-parallel
Strand 5
A
391 396parallel
Strand 6
A
399 404anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
366 369anti-parallel
Strand 3
A
279 291anti-parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
337 342parallel
Strand 6
A
351 358anti-parallel
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There are 10 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
265 270parallel
Strand 3
A
222 224parallel
Strand 4
A
179 185parallel
Strand 5
A
133 140parallel
Strand 6
A
110 113parallel
Strand 7
A
88 90parallel
Strand 8
A
66 69parallel
Strand 9
A
42 47parallel
Strand 10
A
42 47first strand
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