Analysis of interatomic Contacts of Structural Units in PDB entry:
2J69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J69 entry

There are 4 chains in PDB entry 2J69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4HIS 695
B
 GLN 4HIS 695
C
 GLN 4HIS 695
D
 GLN 4HIS 695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 2J69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 40Right-handed alpha
Helix 2
2
A
51 68Right-handed alpha
Helix 3
3
A
81 91Right-handed alpha
Helix 4
4
A
132 139Right-handed alpha
Helix 5
5
A
142 151Right-handed alpha
Helix 6
6
A
169 174Right-handed alpha
Helix 7
7
A
183 189Right-handed alpha
Helix 8
8
A
190 195Right-handed alpha
Helix 9
9
A
195 200Right-handed alpha
Helix 10
10
A
215 226Right-handed alpha
Helix 11
11
A
239 247Right-handed 310
Helix 12
12
A
252 272Right-handed alpha
Helix 13
13
A
273 275Right-handed 310
Helix 14
14
A
282 285Right-handed 310
Helix 15
15
A
291 302Right-handed alpha
Helix 16
16
A
311 326Right-handed alpha
Helix 17
17
A
326 358Right-handed alpha
Helix 18
18
A
361 371Right-handed alpha
Helix 19
19
A
371 410Right-handed alpha
Helix 20
20
A
415 420Right-handed alpha
Helix 21
21
A
427 433Right-handed 310
Helix 22
22
A
435 498Right-handed alpha
Helix 23
23
A
515 523Right-handed alpha
Helix 24
24
A
543 554Right-handed alpha
Helix 25
25
A
561 579Right-handed alpha
Helix 26
26
A
585 656Right-handed alpha
Helix 27
27
A
659 694Right-handed alpha
Helix 28
28
B
5 41Right-handed alpha
Helix 29
29
B
51 66Right-handed alpha
Helix 30
30
B
81 91Right-handed alpha
Helix 31
31
B
132 139Right-handed alpha
Helix 32
32
B
142 151Right-handed alpha
Helix 33
33
B
169 174Right-handed alpha
Helix 34
34
B
183 189Right-handed alpha
Helix 35
35
B
190 195Right-handed alpha
Helix 36
36
B
195 200Right-handed alpha
Helix 37
37
B
215 226Right-handed alpha
Helix 38
38
B
239 247Right-handed 310
Helix 39
39
B
252 272Right-handed alpha
Helix 40
40
B
273 275Right-handed 310
Helix 41
41
B
282 285Right-handed 310
Helix 42
42
B
291 302Right-handed alpha
Helix 43
43
B
311 326Right-handed alpha
Helix 44
44
B
326 358Right-handed alpha
Helix 45
45
B
361 410Right-handed alpha
Helix 46
46
B
412 414Right-handed 310
Helix 47
47
B
415 421Right-handed alpha
Helix 48
48
B
427 433Right-handed 310
Helix 49
49
B
435 498Right-handed alpha
Helix 50
50
B
515 522Right-handed alpha
Helix 51
51
B
543 552Right-handed alpha
Helix 52
52
B
561 579Right-handed alpha
Helix 53
53
B
585 656Right-handed alpha
Helix 54
54
B
659 694Right-handed alpha
Helix 55
55
C
5 40Right-handed alpha
Helix 56
56
C
41 45Right-handed 310
Helix 57
57
C
51 68Right-handed alpha
Helix 58
58
C
81 91Right-handed alpha
Helix 59
59
C
132 139Right-handed alpha
Helix 60
60
C
142 151Right-handed alpha
Helix 61
61
C
169 174Right-handed alpha
Helix 62
62
C
183 189Right-handed alpha
Helix 63
63
C
190 195Right-handed alpha
Helix 64
64
C
195 200Right-handed alpha
Helix 65
65
C
215 226Right-handed alpha
Helix 66
66
C
239 247Right-handed 310
Helix 67
67
C
252 272Right-handed alpha
Helix 68
68
C
273 275Right-handed 310
Helix 69
69
C
282 285Right-handed 310
Helix 70
70
C
291 302Right-handed alpha
Helix 71
71
C
311 326Right-handed alpha
Helix 72
72
C
326 358Right-handed alpha
Helix 73
73
C
361 370Right-handed alpha
Helix 74
74
C
371 410Right-handed alpha
Helix 75
75
C
415 420Right-handed alpha
Helix 76
76
C
427 432Right-handed 310
Helix 77
77
C
433 498Right-handed alpha
Helix 78
78
C
515 522Right-handed alpha
Helix 79
79
C
543 554Right-handed alpha
Helix 80
80
C
561 580Right-handed alpha
Helix 81
81
C
585 656Right-handed alpha
Helix 82
82
C
659 694Right-handed alpha
Helix 83
83
D
5 41Right-handed alpha
Helix 84
84
D
51 68Right-handed alpha
Helix 85
85
D
81 91Right-handed alpha
Helix 86
86
D
132 139Right-handed alpha
Helix 87
87
D
142 151Right-handed alpha
Helix 88
88
D
169 174Right-handed alpha
Helix 89
89
D
183 189Right-handed alpha
Helix 90
90
D
190 195Right-handed alpha
Helix 91
91
D
195 200Right-handed alpha
Helix 92
92
D
215 226Right-handed alpha
Helix 93
93
D
239 247Right-handed 310
Helix 94
94
D
252 272Right-handed alpha
Helix 95
95
D
273 275Right-handed 310
Helix 96
96
D
282 285Right-handed 310
Helix 97
97
D
291 302Right-handed alpha
Helix 98
98
D
311 326Right-handed alpha
Helix 99
99
D
326 357Right-handed alpha
Helix 100
100
D
361 409Right-handed alpha
Helix 101
101
D
415 420Right-handed alpha
Helix 102
102
D
427 433Right-handed 310
Helix 103
103
D
435 498Right-handed alpha
Helix 104
104
D
515 523Right-handed alpha
Helix 105
105
D
543 554Right-handed alpha
Helix 106
106
D
560 579Right-handed alpha
Helix 107
107
D
585 655Right-handed alpha
Helix 108
108
D
659 694Right-handed alpha
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There are 4 sheets in PDB entry 2J69. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 131first strand
Strand 2
A
116 121anti-parallel
Strand 3
A
160 167anti-parallel
Strand 4
A
107 111parallel
Strand 5
A
176 180anti-parallel
Strand 6
A
70 75parallel
Strand 7
A
203 209parallel
Strand 8
A
233 238parallel
Strand 9
A
287 289parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 131first strand
Strand 2
B
116 121anti-parallel
Strand 3
B
160 167anti-parallel
Strand 4
B
107 111parallel
Strand 5
B
176 180anti-parallel
Strand 6
B
70 75parallel
Strand 7
B
203 209parallel
Strand 8
B
233 238parallel
Strand 9
B
287 289parallel
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There are 9 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
128 131first strand
Strand 2
C
116 121anti-parallel
Strand 3
C
160 167anti-parallel
Strand 4
C
106 111parallel
Strand 5
C
176 180anti-parallel
Strand 6
C
70 75parallel
Strand 7
C
203 209parallel
Strand 8
C
233 238parallel
Strand 9
C
287 289parallel
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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 131first strand
Strand 2
D
116 121anti-parallel
Strand 3
D
160 167anti-parallel
Strand 4
D
106 111parallel
Strand 5
D
176 180anti-parallel
Strand 6
D
70 75parallel
Strand 7
D
203 209parallel
Strand 8
D
233 238parallel
Strand 9
D
287 289parallel
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