Analysis of interatomic Contacts of Structural Units in PDB entry:
2J7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J7W entry

There is 1 chain in PDB entry 2J7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 273MET 883
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2J7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
276 287Right-handed alpha
Helix 2
2
A
321 327Right-handed alpha
Helix 3
3
A
328 333Right-handed 310
Helix 4
4
A
334 341Right-handed alpha
Helix 5
5
A
366 385Right-handed alpha
Helix 6
6
A
394 405Right-handed alpha
Helix 7
7
A
421 426Right-handed alpha
Helix 8
8
A
427 443Right-handed alpha
Helix 9
9
A
474 489Right-handed alpha
Helix 10
10
A
489 494Right-handed alpha
Helix 11
11
A
498 503Right-handed alpha
Helix 12
12
A
510 523Right-handed alpha
Helix 13
13
A
536 541Right-handed 310
Helix 14
14
A
542 550Right-handed alpha
Helix 15
15
A
551 556Right-handed 310
Helix 16
16
A
557 572Right-handed alpha
Helix 17
17
A
604 625Right-handed alpha
Helix 18
18
A
629 635Right-handed alpha
Helix 19
19
A
640 656Right-handed alpha
Helix 20
20
A
672 677Right-handed 310
Helix 21
21
A
678 684Right-handed alpha
Helix 22
22
A
702 706Right-handed 310
Helix 23
23
A
730 739Right-handed alpha
Helix 24
24
A
747 766Right-handed alpha
Helix 25
25
A
769 783Right-handed alpha
Helix 26
26
A
808 818Right-handed alpha
Helix 27
27
A
832 836Right-handed 310
Helix 28
28
A
840 847Right-handed alpha
Helix 29
29
A
853 862Right-handed alpha
Helix 30
30
A
862 875Right-handed alpha
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There are 3 sheets in PDB entry 2J7W. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 292first strand
Strand 2
A
303 308anti-parallel
Strand 3
A
588 594anti-parallel
Strand 4
A
575 581anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 661first strand
Strand 2
A
664 667anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
712 717first strand
Strand 2
A
723 728anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il