Analysis of interatomic Contacts of Structural Units in PDB entry:
2J9Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J9Q entry

There are 2 chains in PDB entry 2J9Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 312GLN 639
B
 ASN 353GLN 639
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 2J9Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
337 348Right-handed alpha
Helix 2
2
A
350 365Right-handed alpha
Helix 3
3
A
368 382Right-handed alpha
Helix 4
4
A
384 399Right-handed alpha
Helix 5
5
A
402 416Right-handed alpha
Helix 6
6
A
418 433Right-handed alpha
Helix 7
7
A
436 440Right-handed 310
Helix 8
8
A
466 481Right-handed alpha
Helix 9
9
A
487 501Right-handed alpha
Helix 10
10
A
503 518Right-handed alpha
Helix 11
11
A
521 535Right-handed alpha
Helix 12
12
A
537 552Right-handed alpha
Helix 13
13
A
555 569Right-handed alpha
Helix 14
14
A
571 590Right-handed alpha
Helix 15
15
A
597 615Right-handed alpha
Helix 16
16
A
616 625Right-handed alpha
Helix 17
17
A
627 635Right-handed alpha
Helix 18
18
B
353 365Right-handed alpha
Helix 19
19
B
368 381Right-handed alpha
Helix 20
20
B
384 397Right-handed alpha
Helix 21
21
B
403 407Right-handed 310
Helix 22
22
B
408 417Right-handed alpha
Helix 23
23
B
419 432Right-handed alpha
Helix 24
24
B
433 437Right-handed 310
Helix 25
25
B
465 482Right-handed alpha
Helix 26
26
B
487 501Right-handed alpha
Helix 27
27
B
503 518Right-handed alpha
Helix 28
28
B
521 535Right-handed alpha
Helix 29
29
B
537 552Right-handed alpha
Helix 30
30
B
555 570Right-handed alpha
Helix 31
31
B
571 591Right-handed alpha
Helix 32
32
B
598 615Right-handed alpha
Helix 33
33
B
616 618Right-handed 310
Helix 34
34
B
619 626Right-handed alpha
Helix 35
35
B
627 635Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2J9Q
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il