Analysis of interatomic Contacts of Structural Units in PDB entry:
2JAN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JAN entry

There are 4 chains in PDB entry 2JAN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5ILE 423
B
 ILE 5ILE 423
C
 ILE 5GLY 424
D
 ILE 5GLY 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 2JAN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 13Right-handed alpha
Helix 2
2
A
20 31Right-handed alpha
Helix 3
3
A
50 63Right-handed alpha
Helix 4
4
A
72 80Right-handed alpha
Helix 5
5
A
87 89Right-handed 310
Helix 6
6
A
90 110Right-handed alpha
Helix 7
7
A
124 129Right-handed alpha
Helix 8
8
A
132 140Right-handed alpha
Helix 9
9
A
141 144Right-handed 310
Helix 10
10
A
145 152Right-handed alpha
Helix 11
11
A
152 159Right-handed alpha
Helix 12
12
A
165 187Right-handed alpha
Helix 13
13
A
197 213Right-handed alpha
Helix 14
14
A
249 259Right-handed alpha
Helix 15
15
A
261 273Right-handed alpha
Helix 16
16
A
276 290Right-handed alpha
Helix 17
17
A
291 293Right-handed 310
Helix 18
18
A
294 324Right-handed alpha
Helix 19
19
A
334 345Right-handed alpha
Helix 20
20
A
357 365Right-handed alpha
Helix 21
21
A
370 379Right-handed alpha
Helix 22
22
A
398 402Right-handed 310
Helix 23
23
B
5 13Right-handed alpha
Helix 24
24
B
20 31Right-handed alpha
Helix 25
25
B
50 63Right-handed alpha
Helix 26
26
B
72 79Right-handed alpha
Helix 27
27
B
94 110Right-handed alpha
Helix 28
28
B
124 129Right-handed alpha
Helix 29
29
B
132 140Right-handed alpha
Helix 30
30
B
141 144Right-handed 310
Helix 31
31
B
145 152Right-handed alpha
Helix 32
32
B
152 159Right-handed alpha
Helix 33
33
B
165 187Right-handed alpha
Helix 34
34
B
197 213Right-handed alpha
Helix 35
35
B
249 259Right-handed alpha
Helix 36
36
B
261 273Right-handed alpha
Helix 37
37
B
276 290Right-handed alpha
Helix 38
38
B
291 293Right-handed 310
Helix 39
39
B
294 324Right-handed alpha
Helix 40
40
B
334 345Right-handed alpha
Helix 41
41
B
357 365Right-handed alpha
Helix 42
42
B
370 379Right-handed alpha
Helix 43
43
B
398 402Right-handed 310
Helix 44
44
C
5 12Right-handed alpha
Helix 45
45
C
20 31Right-handed alpha
Helix 46
46
C
50 63Right-handed alpha
Helix 47
47
C
72 79Right-handed alpha
Helix 48
48
C
94 110Right-handed alpha
Helix 49
49
C
124 129Right-handed alpha
Helix 50
50
C
132 140Right-handed alpha
Helix 51
51
C
141 144Right-handed 310
Helix 52
52
C
145 151Right-handed alpha
Helix 53
53
C
152 161Right-handed alpha
Helix 54
54
C
165 187Right-handed alpha
Helix 55
55
C
197 213Right-handed alpha
Helix 56
56
C
249 259Right-handed alpha
Helix 57
57
C
261 273Right-handed alpha
Helix 58
58
C
276 290Right-handed alpha
Helix 59
59
C
291 293Right-handed 310
Helix 60
60
C
294 310Right-handed alpha
Helix 61
61
C
310 324Right-handed alpha
Helix 62
62
C
329 333Right-handed 310
Helix 63
63
C
334 345Right-handed alpha
Helix 64
64
C
357 365Right-handed alpha
Helix 65
65
C
370 380Right-handed alpha
Helix 66
66
C
398 402Right-handed 310
Helix 67
67
D
5 12Right-handed alpha
Helix 68
68
D
20 31Right-handed alpha
Helix 69
69
D
50 63Right-handed alpha
Helix 70
70
D
72 79Right-handed alpha
Helix 71
71
D
94 110Right-handed alpha
Helix 72
72
D
124 129Right-handed alpha
Helix 73
73
D
132 140Right-handed alpha
Helix 74
74
D
141 144Right-handed 310
Helix 75
75
D
145 151Right-handed alpha
Helix 76
76
D
152 161Right-handed alpha
Helix 77
77
D
165 187Right-handed alpha
Helix 78
78
D
197 213Right-handed alpha
Helix 79
79
D
249 259Right-handed alpha
Helix 80
80
D
264 273Right-handed alpha
Helix 81
81
D
276 290Right-handed alpha
Helix 82
82
D
291 293Right-handed 310
Helix 83
83
D
294 310Right-handed alpha
Helix 84
84
D
310 324Right-handed alpha
Helix 85
85
D
329 333Right-handed 310
Helix 86
86
D
334 345Right-handed alpha
Helix 87
87
D
357 365Right-handed alpha
Helix 88
88
D
370 380Right-handed alpha
Helix 89
89
D
398 402Right-handed 310
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There are 8 sheets in PDB entry 2JAN. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
217 220anti-parallel
Strand 3
A
190 193parallel
Strand 4
A
34 39parallel
Strand 5
A
66 71parallel
Strand 6
A
120 123parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
417 422parallel
Strand 3
A
407 411anti-parallel
Strand 4
A
383 385anti-parallel
Strand 5
A
389 390anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
217 221anti-parallel
Strand 3
B
190 194parallel
Strand 4
B
34 39parallel
Strand 5
B
66 71parallel
Strand 6
B
120 123parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
417 422parallel
Strand 3
B
407 411anti-parallel
Strand 4
B
383 385anti-parallel
Strand 5
B
389 390anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 18first strand
Strand 2
C
217 221anti-parallel
Strand 3
C
190 194parallel
Strand 4
C
34 39parallel
Strand 5
C
66 71parallel
Strand 6
C
121 123parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
347 348first strand
Strand 2
C
416 421parallel
Strand 3
C
407 412anti-parallel
Strand 4
C
383 385anti-parallel
Strand 5
C
388 389anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 18first strand
Strand 2
D
217 221anti-parallel
Strand 3
D
190 194parallel
Strand 4
D
34 39parallel
Strand 5
D
66 71parallel
Strand 6
D
120 123parallel
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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
347 350first strand
Strand 2
D
416 422parallel
Strand 3
D
407 412anti-parallel
Strand 4
D
383 385anti-parallel
Strand 5
D
388 389anti-parallel
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